These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACCCCTTCGTACGATGGTCTTGTCGGGGACACTCGTGGT | 1 | 4.68367e-06 |
| AACCCCTTTAAGCGTCTCGTCACGCGTGGACAGTCGGTCT | 1 | 4.68367e-06 |
| AACCCGAGAGGAATAACCACAGTTCTGCGATTTGGCAGGG | 1 | 4.68367e-06 |
| AACCCGCGTGGGACTGGGCTGATTGGGGCATTGCTGGGGC | 1 | 4.68367e-06 |
| AACCCGGAGGATCCGAGTTCACGTGCGTGGAAGTGGTGGC | 2 | 9.36733e-06 |
| AACCCGGGGGACGATTCTTGGCCGTTGCCCGGCGTGGGCA | 1 | 4.68367e-06 |
| AACCCGGGGGTTATGCGGACGGAGGCGCCCCGTGGACTTG | 1 | 4.68367e-06 |
| AACCCGGTAACGCGCTAGTAATTAAAGCATGCTGCTACGC | 1 | 4.68367e-06 |
| AACCCGTGATTGTGCGTGGGTAGAGATAACGGTGTCTGCA | 1 | 4.68367e-06 |
| AACCCGTGCGGAGGAGGTGGGTGCGTGGGCGTGGGCGATG | 1 | 4.68367e-06 |
| AACCCGTGGGAGGTATACGAGGGCCGCACAATCGCGTCCT | 1 | 4.68367e-06 |
| AACCCGTTCCACGCTATAAACGTGGGAGCAAGTGTGGGGA | 1 | 4.68367e-06 |
| AACCCTACGCGTCATTACGGTGAGTAGGCGTCCACTGGCC | 1 | 4.68367e-06 |
| AACCCTAGTACTACGTGGCAAATCATGTTGTTTAATGTGA | 1 | 4.68367e-06 |
| AACCCTCCAATGCGTGGGATTGGCTCCCGCTTTGTGTATA | 1 | 4.68367e-06 |
| AACCCTCGAGGTCACGGGGGGATGCCTTGGGTGTAGGCCA | 1 | 4.68367e-06 |
| AACCCTGCGAGTGGGCTCATCGTGTGGTCATTCTCATTTT | 1 | 4.68367e-06 |
| AACCCTGGCTTCCACAGAGGTATAGGGGGCGCAGCCGTGG | 1 | 4.68367e-06 |
| AACCCTGTAATTCTTCCACGTGGCGCCACGCGATGCATGT | 1 | 4.68367e-06 |
| AACCCTTGAGGCATAGCGTGTGGGTCCCGGAATGATGTGA | 1 | 4.68367e-06 |
| AACCGAAGCGAGGTCTTACGACAACGAGGGCGATGACTCT | 1 | 4.68367e-06 |
| AACCGACTCGATGGTTACCTTCTAGACGCGCCGCCGCTCT | 1 | 4.68367e-06 |
| AACCGAGAATGCAGAAGTTTCTGAAGGCCGCGGCCACAAG | 1 | 4.68367e-06 |
| AACCGAGAGATGTTAGTTGTCAGGGTGAGAGGGGCTAGTC | 1 | 4.68367e-06 |
| AACCGAGCCCACAGGCCACGCATCGTGATCGTGGGGAGCG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.