These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACCGAGGTGCGAGTCACAAAATATCTGAGTGGGTATGGC | 1 | 4.68367e-06 |
| AACCGAGTAGAATGTCACGTATCCTCTAATGCAGGGGGCG | 1 | 4.68367e-06 |
| AACCGATATCGTGATCCACTCGCATAGGTGTCGTGGTGTC | 1 | 4.68367e-06 |
| AACCGATCCACGTGTATGGGTGCCAGTTAACCCGAGTGCG | 1 | 4.68367e-06 |
| AACCGCAGACACGTGGACTATGTCCACGAACCGTGCGCCG | 1 | 4.68367e-06 |
| AACCGCATATCGATTCCACGGACGCCTCAAGGGTGCGAGG | 2 | 9.36733e-06 |
| AACCGCCAATGCACCACGTGATCGCCCACTCAAGGCGATA | 1 | 4.68367e-06 |
| AACCGCCTGATCGAACAGAATGCGCGTGGGGATAGAAGCT | 1 | 4.68367e-06 |
| AACCGCGCGTCTTTGGTGTAGATCTTGTGGATTTACCTCC | 1 | 4.68367e-06 |
| AACCGCGGGGGCGTGGCAGATGTAATGTGTCCGGCGCAAC | 1 | 4.68367e-06 |
| AACCGCGTGGGGGGATCGCCGGAGCCCTCGTGGCGGAAGT | 1 | 4.68367e-06 |
| AACCGCGTGGGGGGGGTACGTTGGGCGTGACATTGAATTG | 1 | 4.68367e-06 |
| AACCGCTAGTGGGAGAAGCGTTGGACGCGGGGGAGCCACA | 1 | 4.68367e-06 |
| AACCGCTGGGGGGTCCGTGATTCCGGACGGGGGACCCACG | 1 | 4.68367e-06 |
| AACCGCTTACTAGGGCCCACGAAGTTCGTGATGTGTAGCA | 1 | 4.68367e-06 |
| AACCGGAATCCACGCAGTTTGGACAATGAAAAGGCTGGTA | 1 | 4.68367e-06 |
| AACCGGACACGCGTTGATGTGCGGTGGAAGTTGACTGCAC | 1 | 4.68367e-06 |
| AACCGGACGCCGCCTTAGACGTTGTACGCGGGAGGGAGTA | 1 | 4.68367e-06 |
| AACCGGATCGGGATGGGGGACGTGATCACGGACCGTGAGG | 1 | 4.68367e-06 |
| AACCGGCAGTGCGCACGCTGCATGAGGTTAAAAAGGGCGA | 1 | 4.68367e-06 |
| AACCGGCCTGGGGTGGCGTTTATGGCAGTTACGGGTATGA | 1 | 4.68367e-06 |
| AACCGGCGGATCGGGCTGGGGTACGGCGAGTTCGCTACCG | 1 | 4.68367e-06 |
| AACCGGCTCGTGGAACGTGGGGACCCGGGTAGGGGACGGG | 1 | 4.68367e-06 |
| AACCGGGACTGCGCGCCGTGGGAGCGCCGTGGAAAGGGCT | 1 | 4.68367e-06 |
| AACCGGGATAGCGGTTTGCCGCGTGGATGTTGTGGGCATG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.