These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGTGGTTATGTACGCCGGCGGTCCGAGTGGTCCCACG | 1 | 4.68367e-06 |
| AAAAGTGTGCTAGCCCCGTGTGAAATGCGGGTCGTGGAAC | 1 | 4.68367e-06 |
| AAAAGTTAAGTGATGCCACGTGATATCGTGGGGGCTACGT | 1 | 4.68367e-06 |
| AAAAGTTATGAGTGCGTACGGCCCACTCAGTCCACCGGTA | 1 | 4.68367e-06 |
| AAAAGTTCCACAGATGGCTGAGTTCCACGCAGATGGGTCG | 1 | 4.68367e-06 |
| AAAAGTTGGTGTTTAAGGCACGTGCTATGCGATGAGTAGT | 1 | 4.68367e-06 |
| AAAAGTTTTCGGATATCAACCCACGCGTGTACCGTCGGGG | 1 | 4.68367e-06 |
| AAAAGTTTTTTGCGGCTGGGACACCCGTCCACGAGCAATG | 1 | 4.68367e-06 |
| AAAATAAATGATCTCCGTCGGAGCTTGACCTGGCTTTCGC | 1 | 4.68367e-06 |
| AAAATAAGCATGTGAGTGCCCAGAGTGTTTCATCGTGGGT | 1 | 4.68367e-06 |
| AAAATAAGTCCGGCACAGTTCGTTGTTCCGGATTACCGGG | 1 | 4.68367e-06 |
| AAAATACACACGTGAGGACGGGCCCAAGGAGATCGTGGGC | 1 | 4.68367e-06 |
| AAAATACACAGTAGACTTGGGCTACGTGACGTGGGGCATC | 1 | 4.68367e-06 |
| AAAATACGAACAACACACACTACGTATCGTGCGTGGGGTG | 1 | 4.68367e-06 |
| AAAATACGCAATTCAAGTGGGAGTGGTGTGGCATTGTGCA | 1 | 4.68367e-06 |
| AAAATACTCCGGATTCTTGCTAATTTATAACGGGCTGACT | 1 | 4.68367e-06 |
| AAAATACTGGACCTATCACGCGTGGGGTAGTGATCTCCCC | 1 | 4.68367e-06 |
| AAAATACTGTCTCGTGCCGAAGCGCCTGACCCATCTACAA | 1 | 4.68367e-06 |
| AAAATAGAGTGGTCGCGTGGAATGTAGTGGTAGGGGAAGC | 1 | 4.68367e-06 |
| AAAATAGGACACGTGAAACCTACGTGGCTGATATTTTTGT | 1 | 4.68367e-06 |
| AAAATAGGCAGTATGTCCCACGAGCGAGAGAGGGTAGGAA | 1 | 4.68367e-06 |
| AAAATAGTACACACGGGGATCGCGACCGTAGTTTGCGTGA | 1 | 4.68367e-06 |
| AAAATAGTAGGTTCCACCGCGGCAGGAGTTAAGGTCAAAG | 1 | 4.68367e-06 |
| AAAATAGTGATGAGCGTGGGCGTGGGAGATGGGCGTGGAC | 1 | 4.68367e-06 |
| AAAATAGTTGAGCGTGGTGGGTTTTGGTGGTTCGTGGATA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.