These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGCGTGGGCCACCGGAACGTAGTGTAGATGTTATGCAG | 1 | 4.68367e-06 |
| AACGCGTGGGCGAGGAAAGGGGGTCGGCGGGGAGCGTGGA | 1 | 4.68367e-06 |
| AACGCGTGGGCGCATCGCGTACGTATGTAATTGTGTGACG | 1 | 4.68367e-06 |
| AACGCGTGTATGAGTGGCTGCCCACGAGACGCGGTTGTTC | 1 | 4.68367e-06 |
| AACGCGTGTCTAGCAGAAAATGGCGAATTACACGTCGGCA | 1 | 4.68367e-06 |
| AACGCGTGTGCTGGTTGGTGGCCGGGGGCCTCGACCACCA | 1 | 4.68367e-06 |
| AACGCGTGTTCTAACGTTTGAGTGCATAGAGTGGGTGTGA | 1 | 4.68367e-06 |
| AACGCGTTGCTAGAGATACAGTGTGGTTTCGAAGTGGGGC | 1 | 4.68367e-06 |
| AACGCTAAAGGGCTTTGCGCGTGCGACGGGCGGATCTCGC | 1 | 4.68367e-06 |
| AACGCTAGTGCTCGGCAGGCTCCAAAGTCGACATAGGACG | 1 | 4.68367e-06 |
| AACGCTATGTCAGGGGTCGCGTGGAGTGGGTCTGGAGTGA | 1 | 4.68367e-06 |
| AACGCTCGTGATATTCGTGGGAACTGGCGTACGGTTAATT | 1 | 4.68367e-06 |
| AACGCTCGTTGACTTCGAAAATGACGCGAACCATCGCATA | 1 | 4.68367e-06 |
| AACGCTGAAAGGCTCGTGGGTTGGGAGGCTGTTCTCGTGG | 1 | 4.68367e-06 |
| AACGCTGAAATCTTAGTGCTACGTGGATCGGTCGCAATCC | 1 | 4.68367e-06 |
| AACGCTGAATCTTATTTCCGCCGGTTAGCCCAGAGTGAGT | 1 | 4.68367e-06 |
| AACGCTGGGGAATGTCGCGCTCGTGGGTTGCGTGTCACCT | 1 | 4.68367e-06 |
| AACGCTGGTGGGTCGGTGGGGGGGAAGGGCGTGGACCCGG | 1 | 4.68367e-06 |
| AACGCTGGTGGGTTCCGGCATTCGTGATCGTGTGGCGTCA | 1 | 4.68367e-06 |
| AACGCTGTTGTTTACATAGCGGTGCGCGGGTGGAGCGCGT | 1 | 4.68367e-06 |
| AACGCTTACACAGAGGCGCACTAGTGGGCTTGCGCGTGGG | 1 | 4.68367e-06 |
| AACGCTTCGTGGGTGTGTGTGGATGACAGGATACGTGCAG | 1 | 4.68367e-06 |
| AACGGAAAGTATAATGAGGCCGTGGGGCCGAAATTATCTC | 1 | 4.68367e-06 |
| AACGGAATTTGGGTTATTCCCCATTATGGAGTGAGTATTA | 1 | 4.68367e-06 |
| AACGGACACGCCTAAGGTGGAGGCATTAATTCACGGGTGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.