These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGGACAGGACGAGGGCGAGTGATGCCTTCACCCACATT | 1 | 4.68367e-06 |
| AACGGACTATCCACGTCCGTTTGATAGGTGTGGGGTGGCC | 1 | 4.68367e-06 |
| AACGGACTCGTACTATGTGATGGGGCGCAGGTCACGCGTG | 1 | 4.68367e-06 |
| AACGGACTTGAGGACTCCGTGCTTGTACGTGGGTTAGTGT | 1 | 4.68367e-06 |
| AACGGAGGGCTGTCACGGGTGGGGACCGATTTTTTGGGCA | 1 | 4.68367e-06 |
| AACGGAGGTCGTCGGAGTGGAAGCCGTGAGTGGCTGGTGG | 1 | 4.68367e-06 |
| AACGGAGTATTAGTGTTCACACGCAAAGCTGAGCCACGCG | 1 | 4.68367e-06 |
| AACGGAGTGGAGTGTGTGTCCTGTTGTAGTGGAGTTGTCC | 1 | 4.68367e-06 |
| AACGGATAACCTGTGCGCAAGCGTGGGTGGAGGGGAAACG | 1 | 4.68367e-06 |
| AACGGATAGGACTAGGAGCATGGAGTAACACGAGGCGGCT | 1 | 4.68367e-06 |
| AACGGATAGGCAGCTCGATCGGTCTCAAGGTAGATGCACT | 1 | 4.68367e-06 |
| AACGGATTAGGTATTTCTGCTCGCGGGTGGAGGCTGCGTG | 1 | 4.68367e-06 |
| AACGGATTTGTATATTGTAGCGGTTACCTCGGCAAAATAG | 1 | 4.68367e-06 |
| AACGGCAAGTGGGCGTGTTTTGTACAATTGGGAGAGGGCG | 1 | 4.68367e-06 |
| AACGGCATCCCGGAAATCGCGGATACTAAGAGCAACTGCC | 1 | 4.68367e-06 |
| AACGGCATCGGATCGCGTGGAACACCACGAGACCTGGGGA | 1 | 4.68367e-06 |
| AACGGCATGCATGTCCTAGCGTGAGCATATCTCTTTGTCT | 1 | 4.68367e-06 |
| AACGGCATGGCGGTGTGTTCCACGATGCAACGCCCACGGG | 1 | 4.68367e-06 |
| AACGGCCAAATGGTGGGGAAAGTGATAAAGGGTTAGACGA | 1 | 4.68367e-06 |
| AACGGCCACACGACCATCTTAAAACTCTATGTGTGTACAA | 1 | 4.68367e-06 |
| AACGGCCATGGGTGGGATCACGCGGAATGCTGAGTGGGGG | 1 | 4.68367e-06 |
| AACGGCCCATTATATGTATCTAACTATGATAACAATTTAT | 1 | 4.68367e-06 |
| AACGGCCCTCGCGTGCCACGTGCCCCACGAGCCGAGTCCA | 1 | 4.68367e-06 |
| AACGGCCGCGGGCGTGGGGTAGCTGGTGGTGGCCGTGACG | 1 | 4.68367e-06 |
| AACGGCCGCTGGAGCGTAGTGTTGCTGTAACTTGTAGGTG | 2 | 9.36733e-06 |
Read fractions use all reads in this source file as the denominator.