These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGGTGGGTGCGTGATATTCGGGTGGTGCGTGGGTGGGA | 1 | 4.68367e-06 |
| AACGGTGGTCGTGGGGCAGTGTGGACGGAGATGGTGGAGT | 2 | 9.36733e-06 |
| AACGGTGGTTGTGGCTTTCCTCTATAAATAGTGGGTTGCG | 1 | 4.68367e-06 |
| AACGGTGTACAATCTTATGTGCGGGGGTTGATGATAGTGG | 1 | 4.68367e-06 |
| AACGGTGTATGGCAGTGCAAAACGTAGTGGGTATGCGTGG | 1 | 4.68367e-06 |
| AACGGTTAGGCTCGCGGCAGTAAGTGCCAGGGTTGGTGTC | 1 | 4.68367e-06 |
| AACGGTTATAATTTCGGCCAGGCTAGGGTATCCAGGTGTT | 1 | 4.68367e-06 |
| AACGGTTCCACGCTGGCGGCGTCGAATGCTGCGTTTCGCG | 1 | 4.68367e-06 |
| AACGGTTCTGCGTGTCGCGGGCCCACGCATTGTGGGAGGC | 1 | 4.68367e-06 |
| AACGGTTCTGGCCGAGCGTGGATGTAAGACGCGTGGGTCG | 1 | 4.68367e-06 |
| AACGGTTGATGTATGCGTGCTCGTGGGGCACAGGACCCTG | 1 | 4.68367e-06 |
| AACGGTTGTTCACCCCGGCACAGCCATACTGAGGGGAGAA | 1 | 4.68367e-06 |
| AACGGTTTTCGACAGGGGAAAGGACGTAACTCAGGTCTTG | 1 | 4.68367e-06 |
| AACGTAAACCTGTGGAACCTGCGTGGGTATCCCGATATTT | 1 | 4.68367e-06 |
| AACGTAAAGTGATATCTTGAGTGTATCCTTGCGTGGGTGA | 1 | 4.68367e-06 |
| AACGTAACTCCACGAGGAAGGGGAGGAGTGGAAATTCTCT | 1 | 4.68367e-06 |
| AACGTAAGGAGGGCGCGGGGCAAGGACGGGGGGCGGTATA | 1 | 4.68367e-06 |
| AACGTAATCTGTACGTGGTATGGTTGTCGTGGCCTTAGGC | 1 | 4.68367e-06 |
| AACGTACAATGTCCGGATTCGCCCAGCGTGGACGGCGTGT | 1 | 4.68367e-06 |
| AACGTACACGAAGGACGGGGTCGTGGGAGTATTAAAATCC | 1 | 4.68367e-06 |
| AACGTACCGTGAAGAATTGCAGGAAGTGACGACTATGAGG | 1 | 4.68367e-06 |
| AACGTACGAGAGTACCGTGAGGTTTGAGCGGACGTGGATG | 1 | 4.68367e-06 |
| AACGTACTGACTCACGTGGCACAACCACACCGTTTGTGGA | 1 | 4.68367e-06 |
| AACGTACTGGGCTAGGGGCTTGGTCGCGTCGTAGGGTGCC | 1 | 4.68367e-06 |
| AACGTACTTGATGCGCAGGGCGCCTGGGAAGAGCGTGGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.