These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGTAGAGATTCTCGCTGGGCGTGGGTCTGTTTAGCCCG | 1 | 4.68367e-06 |
| AACGTAGTGAAGTACTTCCACCTGGAAGGGCGATGCGTGT | 1 | 4.68367e-06 |
| AACGTAGTGTGGGAGGGAATGCAGTGGAGTGTCGCTTTGA | 1 | 4.68367e-06 |
| AACGTAGTTTGCCGAGTATGGGAATGCGTGTGGGATGAGT | 1 | 4.68367e-06 |
| AACGTATTCGTGGCACACTAGCTTGACGGAGGGGAAGCTC | 1 | 4.68367e-06 |
| AACGTATTGTGGGTGTTTGGTAGGACGGTATGCTGTGTGA | 1 | 4.68367e-06 |
| AACGTCACCGCAGGTTCCACGCGGTGGGTGCCCAGAGTAA | 1 | 4.68367e-06 |
| AACGTCAGATGCCATTGAGGTGATTGGCGCTAGCTCCGAT | 1 | 4.68367e-06 |
| AACGTCAGCGTGACGTGGACGCTAATGGAGTAATGGGGGG | 1 | 4.68367e-06 |
| AACGTCAGTCATCGTGGGAGCTGTGTGGTGCGGTCTAGGC | 1 | 4.68367e-06 |
| AACGTCATTTAGGCGCTTCTTTGGGGAAGTGTGGCGTGGG | 1 | 4.68367e-06 |
| AACGTCCACGCGAGTGGAGGACACGGGAGCGACTCGAAGT | 1 | 4.68367e-06 |
| AACGTCCACGTGGATATGTGGAGGCCGTGTCAAAACACGG | 1 | 4.68367e-06 |
| AACGTCCACTTTCACGGGCTCAGATCCATTCCTGATCATG | 1 | 4.68367e-06 |
| AACGTCCCTCAGTGCGTGTACATAAATCTCCACGGCGCAG | 1 | 4.68367e-06 |
| AACGTCCGTCACAGAGTGGGTGCGGACTCCACTCAGGGGT | 1 | 4.68367e-06 |
| AACGTCCTCGCGGGGATGCGCGTGATATGGAATCCCGTCA | 1 | 4.68367e-06 |
| AACGTCCTTACTTCCGTGGCTAAGTCTGTCAAATAGGGTG | 1 | 4.68367e-06 |
| AACGTCGAGGCGATTTGGGTGGATAGACTGGGTTGGTCCT | 1 | 4.68367e-06 |
| AACGTCGTATCGGAGTGGGGAGAAGGGGTTAAGCGTGGCA | 1 | 4.68367e-06 |
| AACGTCGTGAAGTTTATAGGGTGGTGCCTGCGTGGTGGGC | 1 | 4.68367e-06 |
| AACGTCGTGGGTTCGGAGCGGATACCGTGGGTGCTGGACT | 1 | 4.68367e-06 |
| AACGTCGTGGTAGGGAGTGACGAAACGAGGACGGTGTGGG | 1 | 4.68367e-06 |
| AACGTCGTGTACTATGCTTGTGCAGGCGCGTACTCTAACG | 1 | 4.68367e-06 |
| AACGTCGTGTTGCGGTCGCGAATTTAGGTGGGTGACTGTC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.