These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACGTGTGGCTATTCCAAAGAGGGATGAGATTTACTATAT | 1 | 4.68367e-06 |
| AACGTGTGGGCGGTGAGGGTGGACGAGTGGACAATGTCCA | 1 | 4.68367e-06 |
| AACGTGTGTAGGAGGATCCTCTTAACACGTGGATCAGTTC | 1 | 4.68367e-06 |
| AACGTGTTGCGTTGGGTCCTAGTCAGGGGCAATGGTCATG | 1 | 4.68367e-06 |
| AACGTGTTGTGAGGGATTCGGGGTTCCGCGGACTGCATCA | 1 | 4.68367e-06 |
| AACGTGTTTAAGTAATAATCTAGCTATTGTCCGTGGGGGT | 1 | 4.68367e-06 |
| AACGTTATCTTTACACCAGTGCGTGTATGAGTGCAAGGGG | 1 | 4.68367e-06 |
| AACGTTCAGGTCGTGGGCGTGCGGATGTTCGAACACGAGA | 1 | 4.68367e-06 |
| AACGTTCCGCTCCAGCCATTGGCCCGTGGGCTGTGGGCCC | 1 | 4.68367e-06 |
| AACGTTCGATCGCTGGGTGGGTTTTTTTCTCGTAGATCCA | 1 | 4.68367e-06 |
| AACGTTCGCCGATTCGAAGTTCCCGTGACGTGGGGGCCAA | 1 | 4.68367e-06 |
| AACGTTGATCGACACACATATGACGTAGGGTGGATAGGAC | 1 | 4.68367e-06 |
| AACGTTGCACAGCGTGGACTCGTCCGAACTCGCATGGCTA | 1 | 4.68367e-06 |
| AACGTTGCGTGGGCTTGTAGGGTGACCGGGACGCATGGGT | 1 | 4.68367e-06 |
| AACGTTGGCGGGTGGGTACGTCACGCCGCGAGGGAGTGGG | 1 | 4.68367e-06 |
| AACGTTTACGGGGACGTGTTCGGCAGTATGGTTGTGGACG | 1 | 4.68367e-06 |
| AACGTTTAGTGTAGGGTCGAAGAGTGGTTGGGGCGTGGAA | 1 | 4.68367e-06 |
| AACGTTTATTAAATCACAGATGGAGGTGTCGTGGACGGCT | 1 | 4.68367e-06 |
| AACGTTTCGTGGGGCTGCGTATGGGTGTGGCGAACACAGT | 1 | 4.68367e-06 |
| AACGTTTGATAGTTATTCAGGTGTCGACGGCTGGTGGTGG | 1 | 4.68367e-06 |
| AACGTTTGCCTATGGGGTGGTAGGACATTAGAGTGGGTCA | 1 | 4.68367e-06 |
| AACGTTTGGCGTCGGTACCACGCATTAATGTCCCGCGTGA | 1 | 4.68367e-06 |
| AACTAAAGCGTGTATTGGTATATGACGGGTTGAACTCGCA | 1 | 4.68367e-06 |
| AACTAACAGAAGCGGTTTCTGTGTGTGATAAATTGACACG | 1 | 4.68367e-06 |
| AACTAACCGTGGGATAGACCCTAGACCCACGCGAGTCGCG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.