These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTAACGTGGGTCGCGGGACCGGTGCACTCGTGGTAATG | 1 | 4.68367e-06 |
| AACTAAGCAAAGCTACGCGTGGGTGAGACTAGTGGGCGGT | 1 | 4.68367e-06 |
| AACTAAGCCCGTGTCATCGTTTGGGCACACTACAACGTTC | 1 | 4.68367e-06 |
| AACTAATGGTTTTTGCATGATGCGCCTAAAGATCACGTTC | 1 | 4.68367e-06 |
| AACTAATTCGGGTGGAAGTGGCGTGGGCGTGGACGAATTG | 1 | 4.68367e-06 |
| AACTAATTGCGCTGTTCGTGTGGATCATAATCACGCCACG | 1 | 4.68367e-06 |
| AACTACACGTGGGTAGCCGGTCAATTCCCTTAGTGTGACG | 1 | 4.68367e-06 |
| AACTACACTGTGTAGTGAGCTATCCTAAATGTGGATGGAT | 1 | 4.68367e-06 |
| AACTACAGCGAGCGCCGGTAGAGCGAGAGCGGGAGCGAAC | 1 | 4.68367e-06 |
| AACTACATGACGAGCGGACCGGATCTGACTAGTCTGGTAC | 1 | 4.68367e-06 |
| AACTACCGAACCCCGTGAGAACCGGTGCGTCCGTCGTGAC | 1 | 4.68367e-06 |
| AACTACCGTGGGATCGCTAGTGTGGAGAGTGCGGACCACG | 1 | 4.68367e-06 |
| AACTACCGTTCCCTGCCATAAGGCCACCCGTGGCATAGGA | 1 | 4.68367e-06 |
| AACTACGAGTCCTGTGACTGCGTGGTTCTGTACGTTCGAT | 1 | 4.68367e-06 |
| AACTACGAGTGCTCCTAGAGACGCGCGTGGGTACGCCACC | 1 | 4.68367e-06 |
| AACTACGTGAGGTGGTTAGCGTCCATTACTTGCTATAGTC | 1 | 4.68367e-06 |
| AACTACTTGGTAGGACGGCGTGAATAGCGTGGTATTCATT | 2 | 9.36733e-06 |
| AACTAGAACATGAGCAGTTAGAGCCTGGTCGCGTACGTGA | 1 | 4.68367e-06 |
| AACTAGAAGTCTGAAAAACAGGGGCGGTACGGCCTCAGCG | 1 | 4.68367e-06 |
| AACTAGAATGGAACACGGTAAGGTACGGGCATACACAGGC | 1 | 4.68367e-06 |
| AACTAGCCACTGGGTGAGTGGCTGTTGAGCGCGTGACGAG | 1 | 4.68367e-06 |
| AACTAGCGCGATGGAAGTGTGGAAGGCCCACGGCCGTGGC | 2 | 9.36733e-06 |
| AACTAGGCGTTACACGCGCGGCACGCTAGGTGTGCCTATG | 1 | 4.68367e-06 |
| AACTAGGTAAGACTATGAGATGAGTTTGTGCGCGGCAGAT | 1 | 4.68367e-06 |
| AACTAGGTAGATCGTGTGCGTGTTAGAAGGGGGACGGTGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.