These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTCGGCACGCGTGGGGAGTGTGGTGTAGGGAGGGAGGT | 2 | 9.36733e-06 |
| AACTCGGGCATATACTATGGATGTGCTCGTGGGTAGCCGC | 1 | 4.68367e-06 |
| AACTCGGGGACCGCTGAGTGGGTATGAGTGGGCGTAGCTG | 1 | 4.68367e-06 |
| AACTCGGGGTATCGAGGGTTGTGACCGTGATCGTGGGGTC | 1 | 4.68367e-06 |
| AACTCGGTTATCTGGGGTAACATCACGCAGACATGTTGGG | 1 | 4.68367e-06 |
| AACTCGTAAGGGAACCGCATTAGCGCCCGCTAGAAGTGAT | 1 | 4.68367e-06 |
| AACTCGTCCACGGACGTGGGGTATGGGTTAGCCTTTAATC | 1 | 4.68367e-06 |
| AACTCGTCGCAAACCAAGTGGGTGGTCCCAAGGCCGATCA | 1 | 4.68367e-06 |
| AACTCGTGGAGGCCCTATGGACATACAGCACGGAGGCGTA | 1 | 4.68367e-06 |
| AACTCGTGTGTACTCGTCGCGCGTGGGAAAAAACCACTTA | 1 | 4.68367e-06 |
| AACTCGTTGTAAGAGGAATGGGCCTTGGCGTTGTAGCTCT | 1 | 4.68367e-06 |
| AACTCTACAGCCAGGCTGACGTTAATAAGGAAGGACAATG | 1 | 4.68367e-06 |
| AACTCTCACCGTGTACTCCGTGACAGTGTAGAGCGTGGGA | 1 | 4.68367e-06 |
| AACTCTCCGCTCGAGACATGTGGTGGTCACGTCAATGGGT | 1 | 4.68367e-06 |
| AACTCTGACACGCATGAGCCGTGTCGCGTGACTTTTGCAC | 1 | 4.68367e-06 |
| AACTCTGATTCCACGCCTCCGTTTCCGCGTGGTGTATGAC | 2 | 9.36733e-06 |
| AACTCTGTACGCCACGGAGAGACACGTGGGGCACCCACCG | 1 | 4.68367e-06 |
| AACTCTGTCCTGCGTGACCAGGGGGGTGAAAGGTGTCGGC | 1 | 4.68367e-06 |
| AACTGAAATTAGACTTCCCGTGATATTCATCCGAGTGGAT | 1 | 4.68367e-06 |
| AACTGAACATCAGGTCCGTACAGGGTGTGGGGTTTGGGGC | 1 | 4.68367e-06 |
| AACTGAACTGCCTTGCACAACGAGTTGACTCAGGGGCGAG | 1 | 4.68367e-06 |
| AACTGACACCTGGCGTCTAGTGACGCGGAGGTGACACGCG | 1 | 4.68367e-06 |
| AACTGACGGTAAATTTTCGTGGCGTGGGACATGCGTGTGG | 1 | 4.68367e-06 |
| AACTGACGTATGCGGTACACCCACGTTCGTGGCGCGTGTC | 1 | 4.68367e-06 |
| AACTGAGAGATATTGTTTACCCGTGGGGTCAGCGCGGCTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.