These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTGAGATGTTTCCGTGGATTTGAAAGCATACTGAAATC | 1 | 4.68367e-06 |
| AACTGAGGAATTCACGATGCAAGACTACGCGTGGATCAGA | 1 | 4.68367e-06 |
| AACTGAGTGGAGTGGGGTAGTGGGCAGCGCTACGCACGAA | 1 | 4.68367e-06 |
| AACTGAGTGGATATCCGTTGCGGCGGCGCCACGCGTATAG | 1 | 4.68367e-06 |
| AACTGAGTGGTTGTGTGGGAGAGAAGGGCTAGTGCGTGCT | 1 | 4.68367e-06 |
| AACTGATGAACGATGCCGAGCAATTGCGTGGGCCGTTGAG | 1 | 4.68367e-06 |
| AACTGATGTGTACGGTGTTGGTGCGTGGCGTGGGATCGGG | 1 | 4.68367e-06 |
| AACTGATTCCCGTCTGTGTGGCAGGTGCATTACCGCGTGG | 1 | 4.68367e-06 |
| AACTGCACCAGATTACGTTGTTCGAGGGAGTCGTGGCTAG | 1 | 4.68367e-06 |
| AACTGCACGTCACTGAGTGGCTCAAGATGATGCGAGTTTG | 1 | 4.68367e-06 |
| AACTGCATGTTTTAGCTTTTCTGTGATTCGCCGTTCTTAA | 2 | 9.36733e-06 |
| AACTGCCAGGGTGTACACGATGGGCTTGAGATCATCTGAA | 1 | 4.68367e-06 |
| AACTGCCCTTGCGGTGTTGTCGTGGATTGGGGCGATGGTC | 1 | 4.68367e-06 |
| AACTGCGGATACACGCAGGGGGGGCCAGGCGTTGCAAGGG | 1 | 4.68367e-06 |
| AACTGCGGCCAAATGGGCCTTATTGCGTGGGTATGCAGGG | 1 | 4.68367e-06 |
| AACTGCGGTCTGTGCCCTGCGGAGATGTGGAAGTCCCAGG | 1 | 4.68367e-06 |
| AACTGCGTATGTGTCGGATTATTTGGTAGCTGAGCCAAGC | 1 | 4.68367e-06 |
| AACTGCGTCCATGCGTGATGTGCTTTGTGGAGAGTCGTTT | 1 | 4.68367e-06 |
| AACTGCGTGGAACGGTACAATTCTTGTTAAAGTTACGTGT | 1 | 4.68367e-06 |
| AACTGCGTGGGCGGGACGCGGCGCCTATACAGGTACTGGA | 1 | 4.68367e-06 |
| AACTGCGTGGGGAAGGTCCTGTGGTGGGCCGCCGGGGGTC | 1 | 4.68367e-06 |
| AACTGCTCGGGTCCGCATGCGTGGGACGTGGGCGTGGGGT | 1 | 4.68367e-06 |
| AACTGCTTGCTACCGGTGTACCGGTGGCATAAGGCGGGGC | 1 | 4.68367e-06 |
| AACTGCTTGGGCGTGGTTGCGTGGCCAACGTGGGGGGTGC | 1 | 4.68367e-06 |
| AACTGGAATTAAGACGTTAGAGCGGTGTGAAGGCGGAGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.