These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTGGACGAGAATGAGACGGTATTTTTGGCTTTGTCCTA | 1 | 4.68367e-06 |
| AACTGGACGTAACTCGCGCCATGTGGATCGTGTTGGTGGA | 1 | 4.68367e-06 |
| AACTGGATCTCGTGGGTTTCTGCGTAGTGGGTCCCGTGAC | 1 | 4.68367e-06 |
| AACTGGATGTTACTTTGCCCAGCGTGCTACGGCCCCGTGG | 1 | 4.68367e-06 |
| AACTGGATTCGTGGCAATAATATTCAGCCGTGGAATGTGT | 1 | 4.68367e-06 |
| AACTGGCCGTGACGGGGGTCACCGTTATTGACATGGGGCG | 1 | 4.68367e-06 |
| AACTGGCGAGGAGCGGTCTGCGCGTTAATGTGAGAATGCT | 1 | 4.68367e-06 |
| AACTGGCGTGACTGGTTCTGCCTCAGGCTTCGTCTGCAAG | 1 | 4.68367e-06 |
| AACTGGCGTGGATTTAGATAGCGGGCGTGAGTGGTCGAGG | 1 | 4.68367e-06 |
| AACTGGCGTGGGTGCTGGTGCCTTCGTGTGGCGCTAGTGT | 1 | 4.68367e-06 |
| AACTGGCGTGTATAGCGTCGTGGCCAGGCGATGCCACTCG | 1 | 4.68367e-06 |
| AACTGGCTCTGTAGGTCGTCACGCGTGACACGGCGGGCAC | 1 | 4.68367e-06 |
| AACTGGGAAACCAGTCGTGGGTGGTTCTCTTGGTGGGAGG | 1 | 4.68367e-06 |
| AACTGGGATGTATCCTTCGGGGATTCGCGTGGGACAGTAC | 1 | 4.68367e-06 |
| AACTGGGCCGCCGACCACGGGTGGACCGTCTGTGAACAAC | 1 | 4.68367e-06 |
| AACTGGGGCCCCGTGGCGTTGGTCTTAGAACTCGTGTGAG | 1 | 4.68367e-06 |
| AACTGGGGCGACCGTATGGTGGAGTCTCCGCGCAGGGGCT | 1 | 4.68367e-06 |
| AACTGGGGTGGGAACAAAAAGCTCAGATGGGCCCATGAGT | 1 | 4.68367e-06 |
| AACTGGGGTTTGGCTTGCGTGGGCGGGGCCAGGCAGGCGA | 1 | 4.68367e-06 |
| AACTGGGTCACTTGCAAGGACGGATCGTGGATTTGATGAT | 1 | 4.68367e-06 |
| AACTGGGTGTAGTGAGTAGCCCAGAAGGAGACTGTAGTAA | 1 | 4.68367e-06 |
| AACTGGGTTTTTCGTGTGGCGTGGCGTCGCGGGGCATACC | 1 | 4.68367e-06 |
| AACTGGTAATTAAGCGTCCAGTCTCAATATCTAGGTTGTG | 1 | 4.68367e-06 |
| AACTGGTACGACACGGGGGGGTGGTTCGTGGATCAAGTGG | 1 | 4.68367e-06 |
| AACTGGTCACGGTTGTTACGTGGACCTCACGTGTCGGGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.