These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTGTGGCAGAGCCGAGATAATCCCGTGGGAACGAAACT | 1 | 4.68367e-06 |
| AACTGTGGGTCTTATCGCGCGGAACCAAGTATTTGCCTTC | 1 | 4.68367e-06 |
| AACTGTGGGTGCGTGTGTGGGTAACGGATAGATATAGGGC | 1 | 4.68367e-06 |
| AACTGTGGGTGGACTGGGTCCACGGAAGCTGGCTTCTGCG | 1 | 4.68367e-06 |
| AACTGTGGGTGGATGGTCACGTCCTGGTGTTTGCACGGAA | 1 | 4.68367e-06 |
| AACTGTGGGTTAACGTGGAATCGTAACGTGGTTGTGATGC | 1 | 4.68367e-06 |
| AACTGTGGTGTGGAAGGAGGCGGTCGTGTGCGTGGGAGGC | 1 | 4.68367e-06 |
| AACTGTGTGCGGTTGCGCACTAATACGGAGTGGTCGCGAA | 1 | 4.68367e-06 |
| AACTGTGTGGTTCAGGGGAGGCTATGATTGAAAGGAGCGC | 1 | 4.68367e-06 |
| AACTGTTAGAACTCGTACCAGTGTGAATCGTCGCGCGTGC | 1 | 4.68367e-06 |
| AACTGTTGGTATCTGCGTGGACGCGGACTGCCTGGCTGTA | 1 | 4.68367e-06 |
| AACTGTTTACCTGGATGTTCACTGCGTCCCAGGCTGGCGG | 1 | 4.68367e-06 |
| AACTGTTTAGACTGTGGGTGAAGGGGGGATGGCGTCGTGA | 1 | 4.68367e-06 |
| AACTGTTTCGGCGTTCACCCGTGGGCTCTCAACATGACTG | 1 | 4.68367e-06 |
| AACTGTTTTACGTGGGAACCGCTCCCGTGCGTGGAGTATG | 1 | 4.68367e-06 |
| AACTTAAATCGACGTCCGAGTTATTCCACGCAGCGTGAGA | 1 | 4.68367e-06 |
| AACTTAAGGAGCTCTGCTAACGTCGTCACTGTGTATGGTG | 1 | 4.68367e-06 |
| AACTTAATGCTTTAGAGTGGCTGCTAACAATGCCGTTTCA | 1 | 4.68367e-06 |
| AACTTAGCAGGCATTGTGGGAATAACACGTGAGTGGAAGG | 1 | 4.68367e-06 |
| AACTTAGGAATGTGAACGTGGAACAGTCTCCAGAGTGGGG | 1 | 4.68367e-06 |
| AACTTAGGATGATAGTGGCGCGTCAAAAGGGCCACGCGTG | 1 | 4.68367e-06 |
| AACTTAGGTGGTACATGCTGCTGATGACGTAGTGGGGCGC | 1 | 4.68367e-06 |
| AACTTAGTGGGCACGGAACCTAAGCGGCTTATCACGCAGC | 1 | 4.68367e-06 |
| AACTTATGTGATATTCGAGTGTGCGTGGATTGTAGGAGCT | 1 | 4.68367e-06 |
| AACTTCAAGTGGGACCGTCGTGGTGTATGGCTCGTGTGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.