These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACTTCACGCTAGGAGTTCGCAAGTGAGGCAGTATGACTT | 1 | 4.68367e-06 |
| AACTTCATAAAATACACGAGGGCATTGATATTGTTTCTGC | 1 | 4.68367e-06 |
| AACTTCATATTGGGTAATTCACCAGCTCAGGCCGGCCACG | 1 | 4.68367e-06 |
| AACTTCATGGGAAGTGGGAGCATCTCGTGATATGTCTCGC | 1 | 4.68367e-06 |
| AACTTCCACGAAGCGGGCGCTGGTCTGTTTGCCATGGTCC | 1 | 4.68367e-06 |
| AACTTCCACTCGGCGTGGCCAGCTCGTGGGACTGGTGTGG | 1 | 4.68367e-06 |
| AACTTCCCGTGTAAGTCGGTCGTGTGAGCGTGGCGGTGCG | 1 | 4.68367e-06 |
| AACTTCCGTGGCGTTGGGTGTAAGCCCTGCGACGTGGGGG | 1 | 4.68367e-06 |
| AACTTCGTCAGTATGTTTATGGCGTACGTCCGCAATGTTA | 1 | 4.68367e-06 |
| AACTTCGTGACGGATTTAGAGATCTGTAGTCGTGGGGCGC | 1 | 4.68367e-06 |
| AACTTCGTGGATGTTATCTCGTCTGAGTCTCTTCACATCC | 1 | 4.68367e-06 |
| AACTTCGTGGGATTCGGCCCTTCCACGGCAAACGTACGTG | 1 | 4.68367e-06 |
| AACTTCGTTTAGGGTGGTGCGTCTTCAGTGGGCGTGGCAG | 1 | 4.68367e-06 |
| AACTTCGTTTGGTCGTAGTGTGTTGTTGGTAAGGGTAATC | 1 | 4.68367e-06 |
| AACTTCTATCCGGCCGTGGTGCTTAGTACGTTGTTTTCCA | 1 | 4.68367e-06 |
| AACTTCTCATAGGCATATGGAGCGTATGTACACTCGTGAT | 1 | 4.68367e-06 |
| AACTTCTGTTTGGCTGTTTTAACAATGTAGTGCTCGCTCA | 1 | 4.68367e-06 |
| AACTTGAACGCGTGGATCGAGTCACTTGTGTGCCTTCTAC | 1 | 4.68367e-06 |
| AACTTGAAGGGTCGTGTGATGTAGTGGGTGTGCCGCGTGG | 1 | 4.68367e-06 |
| AACTTGACCCACGACGCTCGAAGAAACCCTGGCTGCCACG | 1 | 4.68367e-06 |
| AACTTGATGAGCTACTTGGTACCGTCTTGGGGCCCACGCG | 1 | 4.68367e-06 |
| AACTTGCCGAGGCAACGGGAAGTATACGTGAGCGCCAGAC | 2 | 9.36733e-06 |
| AACTTGCCGTGGACAATTCACAGTTTCAACACGTCGGTTA | 1 | 4.68367e-06 |
| AACTTGCGAAATCACGGGCTAGAGGGGCGACGTGGGAGGT | 1 | 4.68367e-06 |
| AACTTGCGTTCAGTCTGTGTGGGTCGAACGTGGAGTCATG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.