These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGAATGTGCTGATGAGAGGTAATTTGCACTGCGTGGATA | 1 | 4.68367e-06 |
| AAGAATGTGTGGAACTCCTCACCATGGAGGTTCGTATAAG | 1 | 4.68367e-06 |
| AAGAATTCCACAGACGGATAGGGTCATCGTGGGTGACGCG | 1 | 4.68367e-06 |
| AAGACAACGTGGAGAATGACCCGTGGGCTTACAGAAGATG | 1 | 4.68367e-06 |
| AAGACAACGTGTGTGGCGGGCATCTTTACTGTATTGATTC | 1 | 4.68367e-06 |
| AAGACACATCGTGCAGGCGTGGGCGCGTGCGTGGGTACCC | 1 | 4.68367e-06 |
| AAGACACCTTCATCTGGGTAGGCCCGTCTTTCTCTGAGTA | 1 | 4.68367e-06 |
| AAGACACGCATTACGTGGATATCAGTCATGCCAGTAGCGA | 1 | 4.68367e-06 |
| AAGACACGCGTGTGCCATTTCAGGTGCTTAAGTGGGGTGT | 1 | 4.68367e-06 |
| AAGACACGGGTATAGCTGTCCGATCCACGGTCATGGCTGT | 1 | 4.68367e-06 |
| AAGACACGTAGTGGGCGCCATGAAATTGTTACAGTGGATC | 1 | 4.68367e-06 |
| AAGACAGACAATGGGCGGAAAGGTCGGCGACGATCTGGGC | 1 | 4.68367e-06 |
| AAGACAGTTGCTTGTTTAGTACGTGGGAGTGGTAGACAAA | 1 | 4.68367e-06 |
| AAGACATACATATTCAATTTCATACGGTCTGTGCGTGAAT | 1 | 4.68367e-06 |
| AAGACATCACTCACGATCATAGAGGACGCACGCACAGGAT | 1 | 4.68367e-06 |
| AAGACATCCGTCACGCGCGCGTGGCCTAGTCTAGGGGAGC | 1 | 4.68367e-06 |
| AAGACATCGGGGTTTTCTTATACGTAGTGGATAAACGTGG | 1 | 4.68367e-06 |
| AAGACATTGGATTGCTATTCAACGTCACTGTATACGCGTG | 1 | 4.68367e-06 |
| AAGACCAAATTCACGCCGACGTGGAGGACGCGCGTGGAAA | 1 | 4.68367e-06 |
| AAGACCAATTCGCCTTGTACACGGGCAGAGGTCGTGGGCG | 1 | 4.68367e-06 |
| AAGACCACCCATCCGTGGATCACGTGGTATGGGGTCTCGA | 1 | 4.68367e-06 |
| AAGACCACGCAGCCGGAGAGTGGGTCGTGGGTACAGTGTC | 1 | 4.68367e-06 |
| AAGACCACGGACGGGTCCCACGTCACGGAAGTACACGGCG | 2 | 9.36733e-06 |
| AAGACCCAGTCCTCGAATAGGATGGATTCGTGACGCCCCA | 1 | 4.68367e-06 |
| AAGACCCCAGGAAGTTGTGCCACGGCATGGGCAAGTGGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.