These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGACCGACAGACCAGACGCGTGGGGATTCTTGGGGATTA | 1 | 4.68367e-06 |
| AAGACCGCAATGGGCGCCGTAGCTGTTGGGTCTGGCGGAC | 1 | 4.68367e-06 |
| AAGACCGCGTGGAGGTACGTACAGGTCTCGTGGGGGGATT | 1 | 4.68367e-06 |
| AAGACCGGCCTGAATCAGCAGGGTCAGTCCTTGGCAGTCG | 1 | 4.68367e-06 |
| AAGACCGGTGACATAGGGCCTGTGCTCTTGGCGTGAGGCC | 1 | 4.68367e-06 |
| AAGACCGTGGGAAGGCGTGCCGCATTTGTCGCATAAGGGT | 1 | 4.68367e-06 |
| AAGACCGTGGGGTGTGGAATGATGCGCCGGAGGTCCTGCA | 1 | 4.68367e-06 |
| AAGACCTAAGTGGGCAGGCCAATGGTCCCTGCGCGTGGAG | 1 | 4.68367e-06 |
| AAGACCTACTAATTCGTGATAACGTATGCCGGTGGACGCA | 1 | 4.68367e-06 |
| AAGACCTAGGGTGGGTCTAACGGGGCTCGATTCGATTTCA | 1 | 4.68367e-06 |
| AAGACGAACTTGCGGTACCATTGTGAAAGATTGCGTGGAT | 1 | 4.68367e-06 |
| AAGACGACGGTTTGGGAGTGGGCACGGTGTGGGCCGTGCG | 1 | 4.68367e-06 |
| AAGACGACGTTGGGGGAAGTTGTGTGGGAATCAATGCATT | 1 | 4.68367e-06 |
| AAGACGAGCGCGTGGGAGGTGAGACTTCGGTACGAAGTGT | 1 | 4.68367e-06 |
| AAGACGAGTCCACGTGAACGCGTGGAAGCGTCGGTGGGTA | 1 | 4.68367e-06 |
| AAGACGCGATAAATCTCGTGAGAATTGTTTGTGGGTGAGA | 2 | 9.36733e-06 |
| AAGACGCGGGTTTTGTGATGGGTAGGTTCGTGAGTGTGGC | 1 | 4.68367e-06 |
| AAGACGCGTATATGCGTGCGTTGGGTAATGTGGGAAGTGA | 1 | 4.68367e-06 |
| AAGACGGACACTCCGACGGACCGTATTTCGGGTTAGTGGA | 1 | 4.68367e-06 |
| AAGACGGAGCGTTGAGGTGGAGAGGCGAGTTGAGTGGGTA | 1 | 4.68367e-06 |
| AAGACGGCTCCGCGTGGGTTGGTTTGCGGGTATTGGACGA | 1 | 4.68367e-06 |
| AAGACGGGTTTGAAGTTGAGGATTAGTAAAGCTGCGTGGG | 1 | 4.68367e-06 |
| AAGACGGTAAAGATTTGCTAGCACCAAAGGGTCCTAATAG | 1 | 4.68367e-06 |
| AAGACGGTCGTGTACACGCAGTTCGCGCATGCGTAGGATT | 1 | 4.68367e-06 |
| AAGACGTAATCTGTTACTGCGCCACGAGGGGAGTATCACA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.