These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGACGTCAGCTACAGGCTTTTCCGTGGACGAGGGGGGGA | 1 | 4.68367e-06 |
| AAGACGTCATCGGGTCCACGCGTGATTGCCCCTTGACTCA | 1 | 4.68367e-06 |
| AAGACGTCTGCGGGTCGCGTGGAAGACGTGGAAGAGTCGA | 1 | 4.68367e-06 |
| AAGACGTGAATCCACTCTATGCCTGTGTTTCGTGGTCCGC | 1 | 4.68367e-06 |
| AAGACGTGCCATTAATTCTAAAGTTGCGTGGGACGGCATC | 1 | 4.68367e-06 |
| AAGACGTGCGCAAGGGGATTGTTGTGGGGAGAGAGAGCTG | 1 | 4.68367e-06 |
| AAGACGTGGAAGTACTGGCCGTAGTCTACGGGACACGCAT | 1 | 4.68367e-06 |
| AAGACGTGGGCCAGGCCGCGCCTGTTAGGTCTTCGCCGCG | 1 | 4.68367e-06 |
| AAGACGTGTGGAAGTGCGTGGATCGTGCGGTGGGAATCCA | 1 | 4.68367e-06 |
| AAGACGTTGGCATGTGGCCGTGCCTGGCACCGAGTCCACG | 1 | 4.68367e-06 |
| AAGACTACCTGGTGTGACCTATTGGGTCTGGTTTTCTCCA | 1 | 4.68367e-06 |
| AAGACTCCACGCGAGTCTAAGCAGGGTCCCTAGTTGGGTT | 1 | 4.68367e-06 |
| AAGACTCCGTGGAGGCGGTTGAGGGGGACGGGTTCAACCC | 1 | 4.68367e-06 |
| AAGACTCCTGTGGGGCTCACACGGTTCACGCTCTAAAAAG | 1 | 4.68367e-06 |
| AAGACTCGGGGGCGGCGGGTCATTGGCGGATTGGCCTGAG | 1 | 4.68367e-06 |
| AAGACTCGTGCCGTGGTTCTGGTGGATGTATGAGATTGCG | 1 | 4.68367e-06 |
| AAGACTGGTTTTGGCTTGATAAGGGCTGTGGTGTGGCTAG | 1 | 4.68367e-06 |
| AAGACTTCCACAAGCGTGGCCGTTAAGGTCGCGGTGAGAT | 1 | 4.68367e-06 |
| AAGACTTTCACGTGAGCGCGTGACAGAAACTGGGATCTTT | 1 | 4.68367e-06 |
| AAGAGAAATGGTTCGTGGGAAATGGGGTTTCCGCGTTACT | 1 | 4.68367e-06 |
| AAGAGAAGGCGACCTCTGTGCGATTACAGAGACGGCGGAA | 1 | 4.68367e-06 |
| AAGAGAATGATTGATATGGGGGTCGGTGGGCGTGGGAGTG | 1 | 4.68367e-06 |
| AAGAGACAGTGGGCCTAAGTTGAGCGTGGATTCGTGGGAC | 1 | 4.68367e-06 |
| AAGAGACGACCTAAGGCACTGCACTTAAGGTAAGAGTCCA | 1 | 4.68367e-06 |
| AAGAGACGCCTGTTTTGCCGATGAGGTGAGCGAGAATTTT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.