These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAACACGGGATCCAAGGGGAGCGGGCAGGTCCGCGTGGG | 1 | 4.68367e-06 |
| AAAACACGGGTGTGTTGACCGTGGGACGATGATAGTAGTG | 1 | 4.68367e-06 |
| AAAACACGTCAGTGGGGTCCGGGACCCGGTTGGGGTACAC | 1 | 4.68367e-06 |
| AAAACACGTTCGTGGGCGTTAACATTCCAATGCGAGGCGG | 1 | 4.68367e-06 |
| AAAACACTTCCTTGTTCTTGCCCGATCGTGGGAGACTCCA | 1 | 4.68367e-06 |
| AAAACACTTGACCACGCGTGACGGAGCTGTAGCGTTCACA | 1 | 4.68367e-06 |
| AAAACAGCGTGGAGTGGGGGGCGATCCGTGAGGTGAATGT | 1 | 4.68367e-06 |
| AAAACAGGACAGCGTGGGGATCACGTGGGGCTCGAACTTT | 1 | 4.68367e-06 |
| AAAACATCGTGGCCAACACGTCGCGTGAGTAGTGGGGTGT | 1 | 4.68367e-06 |
| AAAACATCGTTGCGTGGTGCGTCGTCCACGGGGAGGTTGA | 1 | 4.68367e-06 |
| AAAACATGCCCACGCTGTCTTGCGTGGGGGTGAAATCGGT | 1 | 4.68367e-06 |
| AAAACATGCGTGGCGAAAGATTGGGCGGATGCCGATTTAG | 1 | 4.68367e-06 |
| AAAACATTGTGGTCACTCGTGGGGAGCGATCTTCGTGGGG | 1 | 4.68367e-06 |
| AAAACATTTTTGCGTGGGGTCTAGTATAGATCACACCTGA | 1 | 4.68367e-06 |
| AAAACCACCGCACTGGCCATTTCCACGGGGCGTGATGGAG | 1 | 4.68367e-06 |
| AAAACCCACACATCACGATAGCGAACTTACGTGCGTGGGG | 1 | 4.68367e-06 |
| AAAACCCACAGTCAGCTGCGTGATTTGAGATACCAGCAAC | 1 | 4.68367e-06 |
| AAAACCCAGTGCGTTCAGTGGGTAGGTTATTGGCGTCACA | 1 | 4.68367e-06 |
| AAAACCGATGCAGTCCTGCGTGGTACATTACATGAAGTGC | 1 | 4.68367e-06 |
| AAAACCGCAGTCGGTTGAGTAAGTGGTAATCTGGTCGGTC | 1 | 4.68367e-06 |
| AAAACCGCGTGGGGGTGGTAAGGACCTGCACGCGTGCATC | 1 | 4.68367e-06 |
| AAAACCGGTGTTGTGTGTTACACGTGGGTTGCGTGGCGCA | 1 | 4.68367e-06 |
| AAAACCGTACCAAGGTAGGCCTAGGAGCGTAGGTTCTCAG | 1 | 4.68367e-06 |
| AAAACCGTGTGGATATGTCTGTCGTGGGTGGTTAAGGAGC | 1 | 4.68367e-06 |
| AAAACCTAACTGCTGCGCCCACTAGGGACATGCGTGAAGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.