These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGAGTCTGAGAAGTAGGAATGGAGGTTTTGGAATATAGG | 1 | 4.68367e-06 |
| AAGAGTGAGCGAGAGGGTGCTCGTGGGTTGAGGAGCGGGT | 1 | 4.68367e-06 |
| AAGAGTGAGCGGTGTGTGCGAGTGCGACACGCGTGGGTGG | 1 | 4.68367e-06 |
| AAGAGTGAGTGGCTCGTGGGGGGAACGAAAATTGTATGAC | 1 | 4.68367e-06 |
| AAGAGTGCGTGGGTGGGAGCGGTCCGCGTGGGGAAGAGGC | 1 | 4.68367e-06 |
| AAGAGTGGAACAATTCAGTGGATGTGCCGCAAGAGTAGGT | 1 | 4.68367e-06 |
| AAGAGTGGATTGGGCTGTACTTGCTGTGGGACGAGAATGG | 1 | 4.68367e-06 |
| AAGAGTGGGAGTGCTGGATTTACGTGGATCATTAGCAATA | 1 | 4.68367e-06 |
| AAGAGTGGGGGATCGACGTGGACGGATCTCGTTCGTGGGG | 1 | 4.68367e-06 |
| AAGAGTGGGGTGCGTGGTCAATTCCTCGCGGGACATCGAG | 1 | 4.68367e-06 |
| AAGAGTGGGGTGGATTGGGCATGGCTGTTGGCTTATCCCC | 1 | 4.68367e-06 |
| AAGAGTGGTGGGTGGCATGTCCTGACGCGTGGGGCCTATA | 1 | 4.68367e-06 |
| AAGAGTGGTGGTGCTCATTGAAGGGGGGAGTGGAAGCGCT | 1 | 4.68367e-06 |
| AAGAGTGTAGACCAAATCCAGAGCAAGGGGCACCTGGCAG | 2 | 9.36733e-06 |
| AAGAGTGTCGCTAGCGCAGTGTACGCGCCCGTGGATAGGA | 1 | 4.68367e-06 |
| AAGAGTGTGGGGGTGCAGCGTGCAGCCGCGTGGGAATCAG | 1 | 4.68367e-06 |
| AAGAGTGTGGTGCGTGTATCTATGCTGCGCGGTATGACAG | 1 | 4.68367e-06 |
| AAGAGTGTGTAATTGGCTTGGTGTCACGCTGCACGCGTGG | 1 | 4.68367e-06 |
| AAGAGTGTGTTGAGGGCGTGTAAGATTGTGCGGGGGCCTA | 1 | 4.68367e-06 |
| AAGAGTTAGATGAAAGGATCGCGCGAGTGGGGGTTGAGCG | 1 | 4.68367e-06 |
| AAGAGTTAGTTACGTCCACGTCACGTGGGTTCGTCTGCTG | 1 | 4.68367e-06 |
| AAGAGTTCGCGTGGGAATGTATGTGGCGGGGCGGGTACTG | 1 | 4.68367e-06 |
| AAGAGTTCGTGGGGTGGTTACTTCCCCGTTAGATCACGCG | 1 | 4.68367e-06 |
| AAGAGTTGCTGCGGGTGCGTGTCCGTGGGACTCGGGTCCG | 1 | 4.68367e-06 |
| AAGAGTTTAACCCTCCGTGTTAGGTTGTGGGAGCGTGGAT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.