These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGAGTTTTATATCTTTGGGTGACGGTGGAGGATTACATA | 1 | 4.68367e-06 |
| AAGAGTTTTCACGGTAGCGGTGAATTGCGGGGGCGCCCCA | 1 | 4.68367e-06 |
| AAGATAAACGTTCGAAGCGTGTGGAAATGCCCGCATGCGA | 1 | 4.68367e-06 |
| AAGATAAAGTGACGAGGGTGGAAGTGGGGAGTTGAGCGAG | 1 | 4.68367e-06 |
| AAGATAAATCATGGCATGCTGTGATGGGTGTGGGAATGAT | 1 | 4.68367e-06 |
| AAGATAACGGGCAAGGGAGGGCAGGCGGACGTTTGTTTGT | 1 | 4.68367e-06 |
| AAGATAATGTACGTGGAAGGGTGGTGAGAATACAGTGGGG | 1 | 4.68367e-06 |
| AAGATACACGAGGCCACGGGTGAGAGGGGGCGAGGGTGGG | 1 | 4.68367e-06 |
| AAGATACATATATAACGAAAACGACGTGATCCTAGTCCTA | 1 | 4.68367e-06 |
| AAGATACATCGTGGACATACCTTACCGGATTCCATGGGAG | 1 | 4.68367e-06 |
| AAGATACGGCTTTGTCACGCGTGGTAATTGGCGAATCGTT | 1 | 4.68367e-06 |
| AAGATACGTGGGGTATCGATGGCGTCTACGGATTTGTGGA | 1 | 4.68367e-06 |
| AAGATACTCAGTCTACACGGGGGGTGCGCGTGTCGCGGGG | 1 | 4.68367e-06 |
| AAGATAGCAAGCGATGATGGCCACGCGTACTACGCCACGC | 1 | 4.68367e-06 |
| AAGATAGCTCGGTTAGGGGTGGGCGGATAGGGGACATCCA | 1 | 4.68367e-06 |
| AAGATAGGTCTGTATCTCATGAGGGAGGGGGCCACGATGG | 1 | 4.68367e-06 |
| AAGATAGGTTAGATAGAATGTCGGTGCGATACGCGTGGAT | 1 | 4.68367e-06 |
| AAGATAGTCTGTCCGGCGGCACACGAAGATCGTTAACTGT | 1 | 4.68367e-06 |
| AAGATAGTTAAAAGGATCATATGATCCCTGGAATGCCGAT | 1 | 4.68367e-06 |
| AAGATAGTTGAGTGTGTGCATAGGTCACGGTCTGACGTGG | 1 | 4.68367e-06 |
| AAGATATACAGGCGTGACGGAGGATTGGCCGGACCCGACA | 1 | 4.68367e-06 |
| AAGATATAGGCGAAAGTCGCGTGGTAGGTGTGCACGGTCG | 1 | 4.68367e-06 |
| AAGATATATGTGTTATTTTCGTAGGAAGGAGGTTAGGTAT | 1 | 4.68367e-06 |
| AAGATATCGTCACGGCGCAGCGCACTAGGGGAGCTTTTCG | 1 | 4.68367e-06 |
| AAGATATCGTCATGGAGCGTGGGACCGTATCGTGGGAGTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.