These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGATATGCGTGGGATCGTGAACACAGCGCAACTAAGTGC | 1 | 4.68367e-06 |
| AAGATCACGAGTATCGAACGGCGTGATAGCCTGGATTTAG | 1 | 4.68367e-06 |
| AAGATCACGCGTGGTTGTGGAAGCTGCTCCGTGTCCGACT | 1 | 4.68367e-06 |
| AAGATCAGATGTCCGGGACTCTGTTGCAGTTATAGCCACG | 1 | 4.68367e-06 |
| AAGATCAGCTCGCCAATGTCGTGGGGGTCAGAAGAACTGT | 1 | 4.68367e-06 |
| AAGATCAGGATCTATGGCCCCTATCCCGTGGCATCCGTGG | 1 | 4.68367e-06 |
| AAGATCCAACGCGGAGGAGCGTGGGGGCTGAACCGCTCTC | 1 | 4.68367e-06 |
| AAGATCCACGGACCAGATGCTCGAAAGAAAGGTAAGCATT | 1 | 4.68367e-06 |
| AAGATCCGGCGTGGGAAATGGGGGGGCGGCGAGGTGAGCT | 1 | 4.68367e-06 |
| AAGATCCGTGGGTGTGCCGGTACTATTTCGTGCGTGGTCT | 1 | 4.68367e-06 |
| AAGATCCGTTTCCCAGATTGTCAGAGAGTGTGATTGTCGG | 1 | 4.68367e-06 |
| AAGATCGAGAGGATGGTAGTGGGGCATGGCGGAGGGCTGT | 1 | 4.68367e-06 |
| AAGATCGCTATTAGCCACGCAGGTCTGATCGCTCACGGGG | 1 | 4.68367e-06 |
| AAGATCGCTGGTACGAGAGGTTTATGACATTTGGGTGGGC | 1 | 4.68367e-06 |
| AAGATCGTGAAGTTGCCACCCATTTTTAGGTCGGTCCACG | 1 | 4.68367e-06 |
| AAGATCGTGCAATATCCGAAGGGTTGGCCCCACGAGCTTT | 1 | 4.68367e-06 |
| AAGATCGTGGATGCGCGGCGATGCCACGCGTGTGTATACT | 1 | 4.68367e-06 |
| AAGATCGTGGGTGCAATAACGCTAGCGCACGGGGCTGGCT | 1 | 4.68367e-06 |
| AAGATCGTGTCTGTTGTAATAGAAGCCGCGTCTGGATGAA | 1 | 4.68367e-06 |
| AAGATCTAGTGGGGAGCCTGGCACATTTGCGTGGGGTGGG | 1 | 4.68367e-06 |
| AAGATCTTAGTGGGTTCGGCTTATTCACGTGGTAGACGCT | 1 | 4.68367e-06 |
| AAGATGACGTGCACCGCGAGTGTGGGAGTATCGAGCGTGA | 1 | 4.68367e-06 |
| AAGATGAGCTGGCCTGGACCGTGGACTGAGGGTAACCAAG | 1 | 4.68367e-06 |
| AAGATGAGGCGGGTTTCGAGTGTGGAAGTACTGGTGAGGC | 1 | 4.68367e-06 |
| AAGATGAGTGGGAGGGGATATTGGAATCGTCAGGTGGGTG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.