These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGATTAAAAGGGTTAGTGTACTTTTATTGTTATTTTGAT | 1 | 4.68367e-06 |
| AAGATTAAGGTGTTGGCATAATGCGCGTGGGAATGTGTAA | 1 | 4.68367e-06 |
| AAGATTAATGAGCCACCCTGAGCCTCGTGGATGACTGTGG | 1 | 4.68367e-06 |
| AAGATTACAATGCGCAGCGTGGGCGGAACCATAGCGTGAA | 1 | 4.68367e-06 |
| AAGATTACCAATGAAACACGGTGTTCGTGTTTTTGACTTT | 1 | 4.68367e-06 |
| AAGATTAGCACGCGTGGGCCGTATCCAGTGGATAAGAGCG | 1 | 4.68367e-06 |
| AAGATTCCACGATGCCAGACGGTGATCTGGGCAGACGGTT | 1 | 4.68367e-06 |
| AAGATTCGAGACGGTAGTTGTTCCGACAACGTTCGGTGCT | 1 | 4.68367e-06 |
| AAGATTCGGTACGCGTGAAACGTTGGGGGGGAACGACACG | 1 | 4.68367e-06 |
| AAGATTCGGTGCAGACGGCACTGTGATTCCTGGTTGCTCG | 1 | 4.68367e-06 |
| AAGATTGACGGGGAGCGAGAGTGCCGCGAGGACCGGCACG | 1 | 4.68367e-06 |
| AAGATTGCACCTGCGCGTTTGATGGGGAGCGTGGGAGATC | 1 | 4.68367e-06 |
| AAGATTGCCACGGTGTTATATCTCGGGTGGACTACAGTCA | 1 | 4.68367e-06 |
| AAGATTGCCATAACATCGCGTGGGACGCCTAATTAGTGGG | 1 | 4.68367e-06 |
| AAGATTGGCTCATGGATGTGCAGGTGAGTTCGGGGTCCTC | 1 | 4.68367e-06 |
| AAGATTGGGCGAGGAGTGTCGGACGAGCGTTCGTGCACCA | 1 | 4.68367e-06 |
| AAGATTGGGCTCATCGTGGAAAACTCGATTTTGCGCGGGG | 1 | 4.68367e-06 |
| AAGATTGGGTCAGTTAGCGGGACAGGATTGAAGTATGTAC | 1 | 4.68367e-06 |
| AAGATTGTATCGGGTATATATAGCAGGAGCGTGGGACCGG | 1 | 4.68367e-06 |
| AAGATTGTCACGCAGTATTAGGTCGATTTCCGTGGAATGA | 1 | 4.68367e-06 |
| AAGATTGTGGCTACTTCGTGAAATGTGTACGACAAGGGCT | 1 | 4.68367e-06 |
| AAGATTGTTGCGTCGCCACGTTAAACGTGGCAGGCGTGGA | 1 | 4.68367e-06 |
| AAGATTTAGGCAGGTGTTTCTATAGTGTGGGCTCGTGTCG | 1 | 4.68367e-06 |
| AAGATTTCGAGGAATGAAGTGGGTGTGTAGCGACCGTGGG | 1 | 4.68367e-06 |
| AAGATTTCTTGGGGTTGAGCTGAGCAGACGCGGCGAGCTC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.