These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGATTTGGAATCTGGCAGCCAGTGGCGGCCACCTGATAG | 1 | 4.68367e-06 |
| AAGATTTGGGTCGTTGTATCCTGCGTGGCTGATTGCGTGT | 1 | 4.68367e-06 |
| AAGATTTTGCAGCGTCGTTTAATGCGTGGGTCCCCTCGGA | 1 | 4.68367e-06 |
| AAGCAAACGGGATGCGCATCAGCGTGACGTGGGCCTCTTG | 1 | 4.68367e-06 |
| AAGCAAAGTGGGGCATGGGGTGTCGCGGGAAAGACGCTGT | 1 | 4.68367e-06 |
| AAGCAAATTTAGGCTCCCACGAGTTGTGAGGTGCGTGGGA | 1 | 4.68367e-06 |
| AAGCAACATTTCGCGAGAAATCTCACGGACAGTGGAAAAG | 1 | 4.68367e-06 |
| AAGCAACGTGGTTACTGTGAATTGTCGTGGGTTTTACGTG | 1 | 4.68367e-06 |
| AAGCAAGAAGTTTAGGTTGAAGAGCGGTCCCAGGGTCGTA | 1 | 4.68367e-06 |
| AAGCAAGAATCACGAGGTGAGCGCGCGTGGGATGGTTGCA | 1 | 4.68367e-06 |
| AAGCAAGCCCTGATCGGGTCAGATTCTCACCTCGTACTAT | 1 | 4.68367e-06 |
| AAGCAAGCTAGCGATGAGGCGCCCGTGGAAGCGTGGAGAG | 1 | 4.68367e-06 |
| AAGCAAGTGGCATTTAGTGGACTCCTGTGGAAATGCACGA | 1 | 4.68367e-06 |
| AAGCAATCACTCTAGTGTTCCCACTGATGTGCGTGGAGTC | 1 | 4.68367e-06 |
| AAGCAATGGGAGTGGGAGAGGGTTGCCGCGGTCACTTGCG | 1 | 4.68367e-06 |
| AAGCACAATCGGTGCGTGGTGGTAGTGATCAGTCTGACCT | 1 | 4.68367e-06 |
| AAGCACACGCATTGTGGAGCAACCGGTAGATGCCAATGCG | 1 | 4.68367e-06 |
| AAGCACACGGCTTTACGTGGCGGAATGTGTGGAACATGGG | 1 | 4.68367e-06 |
| AAGCACAGCGTGAGATAGCTTGTATCTCGTGCGGGCGGAC | 1 | 4.68367e-06 |
| AAGCACATAGAGGCGTTCACACGCGTGGGGCCGCTAAGAT | 1 | 4.68367e-06 |
| AAGCACCCACATAGGACGGTTTTGGGATGGGGTGATCACG | 1 | 4.68367e-06 |
| AAGCACCCGGAGGTTACGGAGATGAGGCGCAAGCGGGAGA | 1 | 4.68367e-06 |
| AAGCACCGAAGGAGCAGTAGCTGTGCGTGGGATGCCGTGC | 1 | 4.68367e-06 |
| AAGCACCGCTCAGTAGACGCGAAGGTGCACTCCGTGGCAC | 1 | 4.68367e-06 |
| AAGCACCGTTGCGTCACCCTTGTCGGGTAGCACTTCCACG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.