These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCCACGAGTCCATCCACGACAGGGGTAATAAGGTGGTA | 1 | 4.68367e-06 |
| AAGCCACGATTGTGTCTGGCCATGGGCATAGGGTTCGGTA | 1 | 4.68367e-06 |
| AAGCCACGCGTGATCCTTAGTAATGTCTACGTGGACGTGT | 1 | 4.68367e-06 |
| AAGCCACGGGTGGAGATTGTGCGAATGCTGTCTCGTGGTC | 1 | 4.68367e-06 |
| AAGCCAGATCCCCCGCGTGTTCGTGTGGATGCGAGATAGG | 1 | 4.68367e-06 |
| AAGCCAGGGATCACGCAGTCGGGCTGGGGGGAACGGTTCT | 1 | 4.68367e-06 |
| AAGCCATATGCTCCTTACCTCGTCCAAAACAGGCTTCACC | 1 | 4.68367e-06 |
| AAGCCATGCGTGGGCTCTGCGCGATTTGTTGACTGGTGCT | 2 | 9.36733e-06 |
| AAGCCATTTCGCGCTTTATGTGCGTGGGTTGCAGTTCAAT | 1 | 4.68367e-06 |
| AAGCCCACGAGAGCTGCAGTGGATTGTGGTGAAGTCTCCA | 1 | 4.68367e-06 |
| AAGCCCACGGCGTGAACTGTGGAGTGCGAGTTATCAAGTT | 1 | 4.68367e-06 |
| AAGCCCACGGGGAGTGCGCACTCAATGGCTACAGTTCACG | 1 | 4.68367e-06 |
| AAGCCCACGGGGGTGGGAGGCGGGAATCAGCTCGATGTGG | 1 | 4.68367e-06 |
| AAGCCCACGTACACGACGTCCGAGTCGTGCGTCGCCACTT | 1 | 4.68367e-06 |
| AAGCCCACGTCTGGTTGGCCCGCGGCGTGAATTTGTGGTA | 1 | 4.68367e-06 |
| AAGCCCACGTGGGGGGGGTGAGTCTCAGAGCGTGGGGATC | 1 | 4.68367e-06 |
| AAGCCCATCACGGATTTAGCGTGCGGCATCATCGATGACG | 1 | 4.68367e-06 |
| AAGCCCCAGGGTCTTGGCAGCGTGGGCGTGGGTAATGGTT | 1 | 4.68367e-06 |
| AAGCCCCCACGCGGGGTTGTTCCTTGGGTCGAGGGGCTGG | 1 | 4.68367e-06 |
| AAGCCCCCACGTGCAGGTGACGATTGTGTGGAATCCAGAA | 1 | 4.68367e-06 |
| AAGCCCCTTGGAGTCCCGATCCTCAGTGGTAGAAAGTTAA | 1 | 4.68367e-06 |
| AAGCCCGCTGTAGTAGCGTACGTGGATTACAGCGCTTCGT | 1 | 4.68367e-06 |
| AAGCCCGGGGTCACGCGTGCGCTTGCGTGGCGTGGGGCCG | 1 | 4.68367e-06 |
| AAGCCCGTGGATAACATTGTGGGTAGCTGTGCGCGTGGAC | 1 | 4.68367e-06 |
| AAGCCCGTGGGGGAATCTGATATTGCGCGTACGGTGTTCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.