These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCAGGCGTGGATGTATAACCGTGCCTGGACTGTTCCCA | 1 | 4.68367e-06 |
| AAGCAGGGCGCCAAACGCCTGTGTGATGGAGGAATGTTGA | 1 | 4.68367e-06 |
| AAGCAGGGTCGTGGGATTAAGGTCCTCGTGGACATTAGGG | 1 | 4.68367e-06 |
| AAGCAGGTCTTTGATCGTCTCTGCGTGGGGTCATTAATCT | 1 | 4.68367e-06 |
| AAGCAGGTGAAGGTTTGTCGGCGGGATTTGTTCGCCACCA | 1 | 4.68367e-06 |
| AAGCAGTGGCAAGGGTGGGGCTCTTCAATGTAGCGTGGCA | 1 | 4.68367e-06 |
| AAGCAGTGGCTTGCATAAACTGAATAAGGTCCGTGCGGAG | 1 | 4.68367e-06 |
| AAGCAGTGGGTCAGTCTTTTGTCATGCAGGAATTGCGGAG | 1 | 4.68367e-06 |
| AAGCAGTGTAGACGTGCGTGAAGCGTGGTATTCAGGTGCG | 1 | 4.68367e-06 |
| AAGCATAAAGGGAAGTCACCTCGACTGTGCGTGGGAATGT | 1 | 4.68367e-06 |
| AAGCATCCATAGCGGTAGCTAGCTAAGTGGGAGGGGCTCA | 1 | 4.68367e-06 |
| AAGCATCCGGGGGGTGAGCGTGGGAGACCATTCACGGTGG | 1 | 4.68367e-06 |
| AAGCATCTGAATGGGAAGTCAACCGGCAAGCTCACTATAA | 1 | 4.68367e-06 |
| AAGCATGAGGTGGTCTGGTGCTCCACGTATTCTTTCGTGT | 1 | 4.68367e-06 |
| AAGCATGTCACAGTTTGTCTCGATGAGCAAGTGGTTTCCA | 1 | 4.68367e-06 |
| AAGCATGTCGTGGGCGTGGCTTGATGTAGTGGGAAATACT | 1 | 4.68367e-06 |
| AAGCATGTGTTCCGTGTGGGGTCCGTATTATTCACGTGGA | 1 | 4.68367e-06 |
| AAGCCAAAGTTCCACGCGGGGTTACATATCAACGTGGCTA | 1 | 4.68367e-06 |
| AAGCCAACGCGTGTGCGCGCGTGACGTCTACGCTTGGCGT | 1 | 4.68367e-06 |
| AAGCCAAGACCATTAACCGGCCTGACTAGGGGCCTTCTAG | 1 | 4.68367e-06 |
| AAGCCAAGTGGAGTGGCTAGAGGGGGCGGCGGGGGCGCTG | 1 | 4.68367e-06 |
| AAGCCAATGACGTGGGAGTTAGGGGACGCGGTCTGCCGCC | 1 | 4.68367e-06 |
| AAGCCACAGTGCTCAAAACAGTCGCTCGTTAGTGGGCGTT | 1 | 4.68367e-06 |
| AAGCCACATCGTGGGCGTCTGTGTGTTCGTGTGGGCCGTA | 1 | 4.68367e-06 |
| AAGCCACCATCGAGTTGAACATTGGTTATAGTGGCCACGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.