These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCTTAAGCAACGAGTCTGAATACTAGATGCGATGAGGA | 1 | 4.68367e-06 |
| AAGCTTAAGCGTGGATTGGCAGCTTGGTAAGGGCAATAGC | 2 | 9.36733e-06 |
| AAGCTTAAGTAGACTGCCGATCACGTGGTCACGCGAGTAA | 1 | 4.68367e-06 |
| AAGCTTAGGAAAGGTCACTGTCTACTCGGGTTAACATGTA | 1 | 4.68367e-06 |
| AAGCTTCCTGTGGGGTCGTTCCTGGCCATTTTGGTGGCCA | 1 | 4.68367e-06 |
| AAGCTTCGATGCTGCGTGCTGGTTCCCAAGAGCGTGAGGG | 1 | 4.68367e-06 |
| AAGCTTCGGAGGGTGGGGGGTCGGGATGGTGGGGGTATGG | 1 | 4.68367e-06 |
| AAGCTTCGTGACTGAGTGGGTGGCTAGTGGACAAGGAGTG | 1 | 4.68367e-06 |
| AAGCTTCGTGGGTTCGGCGTGCTGCTACACGGAGGTGATG | 1 | 4.68367e-06 |
| AAGCTTGAGCGTGTTCCTCGTGGTAAGATCTACGTGAGTT | 1 | 4.68367e-06 |
| AAGCTTGATTCACGACACCCAAAGGGTGCCGTTTCATGGA | 1 | 4.68367e-06 |
| AAGCTTGCACGCGCGGTCACACAGCGTGTAGTCCACTCTC | 1 | 4.68367e-06 |
| AAGCTTGCCCGTCGCATGGAAAAATCACGCGTGGAACCAT | 1 | 4.68367e-06 |
| AAGCTTGCCGTCCTATGTCCGTTAGCGGTGTACGCCGATT | 1 | 4.68367e-06 |
| AAGCTTGCGTGCTGCACTCCACGGCGCATGAGGGTGGCCG | 1 | 4.68367e-06 |
| AAGCTTGGACGTACTTTTATTGAACGTTGCTACGATGCAC | 1 | 4.68367e-06 |
| AAGCTTGGGGTGGGTAAGCGGCTGTTGAGCGCCCACGATG | 2 | 9.36733e-06 |
| AAGCTTGTATCGTGGGTAGTAAGCTCGGTCTACCCAATAT | 1 | 4.68367e-06 |
| AAGCTTGTCGCCGGTATTGGCTCGAGGGTTCGGTTTCAGT | 1 | 4.68367e-06 |
| AAGCTTGTCGTTCTGATCCGTTATCGAATGCTGTTCCTCT | 1 | 4.68367e-06 |
| AAGCTTGTGGATCCTATAGGCTTCACGCGCTGGAGGAGGG | 1 | 4.68367e-06 |
| AAGCTTTGAGCGCCGCTTCCGTGGACTTTCGTGGAATTGA | 1 | 4.68367e-06 |
| AAGCTTTGGGAAAGCACTTCTCTCGCTAGAAAAGTACTTG | 1 | 4.68367e-06 |
| AAGCTTTGTTGTAACGCAGTCCACGGGCTATCACCGGGTC | 1 | 4.68367e-06 |
| AAGCTTTTAGGGCGTGCGGACGTTGATCGCGTGGGAACGT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.