These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGAAAAAGGGTTCCGGTGTGGCTCTCGCGTGGAGTGGG | 1 | 4.68367e-06 |
| AAGGAAAACATACGGCTGCCCGCGTGGGGTTGGGAGTACA | 1 | 4.68367e-06 |
| AAGGAAAATTGGAGACATATGTCGCCCCGCGTGGGTGGAC | 1 | 4.68367e-06 |
| AAGGAAAGGGAGGTGTGCCTTTTAAGTTAATCCATGTGTT | 1 | 4.68367e-06 |
| AAGGAACACATGGACGACCACGTGTCAATTCCACTGGATA | 2 | 9.36733e-06 |
| AAGGAACGGCATACGTGGGGTTTTCATAACCGTAGCGTGG | 1 | 4.68367e-06 |
| AAGGAACGTATGGTCGTGATGTTCGTGGGAGGGAAATACG | 1 | 4.68367e-06 |
| AAGGAAGACACGCGCGGAAATAGAGGGGCTGCATGAGCAG | 1 | 4.68367e-06 |
| AAGGAAGATACACGGGTCACGCGGAAGAAGGGCCGTGGGA | 1 | 4.68367e-06 |
| AAGGAAGCAGTCTCTCCAACTCAGTCGTCACCTCGGCTGT | 1 | 4.68367e-06 |
| AAGGAAGCCAAGACTTGACGCGCGTGGAGGGGTTTGGTCT | 1 | 4.68367e-06 |
| AAGGAAGCGGTAAAGTGGGTCAGTGGGTGGGTCTGACGTG | 1 | 4.68367e-06 |
| AAGGAAGGAGAGTGGGAGGGGGGCAGGAGGAGCGGCCCCA | 1 | 4.68367e-06 |
| AAGGAAGGCGTGGAATGAGTACGAGTGGACTGCGTAGCTA | 1 | 4.68367e-06 |
| AAGGAAGGCGTTTCCACGCGTGTAGATGACTCGTGGAGAT | 1 | 4.68367e-06 |
| AAGGAAGTCCAATTCCACGGAGGGAATACGCCGACACGCT | 1 | 4.68367e-06 |
| AAGGAAGTCGTGGAATCGGTGGTAGTGAGCATGGTGGACA | 1 | 4.68367e-06 |
| AAGGAAGTCGTGTGGGTTTGGAGAGCGCGTGGAGGCACGG | 1 | 4.68367e-06 |
| AAGGAAGTCTACCTATCTACGCCACGTGCGTGGGTGTAGA | 1 | 4.68367e-06 |
| AAGGAAGTGGGCTCAGGATGTGTGTAGTAGTGGGGTGGGG | 1 | 4.68367e-06 |
| AAGGAATCATCATGGTCACGAGTGCCGGTGTCTAGGTCCG | 1 | 4.68367e-06 |
| AAGGAATCCCCCGATCTGAATTATCCCGTGGGGGTCCGGC | 1 | 4.68367e-06 |
| AAGGAATGCGAATGCTTCATTTGTGCCAGTGACCCCACGG | 1 | 4.68367e-06 |
| AAGGAATGTTCTGTGGGCATGGCTTTATCGCGTGGGGACC | 1 | 4.68367e-06 |
| AAGGAATTACACACGGTAGGCCCCCTAGTGGTGCGTGGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.