These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGGGGAGACCAGGCGTTATCCACGAGTGGAGGCGATGG | 1 | 4.68367e-06 |
| AAGGGGGAGGCAGGTCACGTGGGCGATCTGGGGGGAGTCG | 1 | 4.68367e-06 |
| AAGGGGGATGGTGGGTGTGGGGCGTGGACAAGCCGATCTC | 1 | 4.68367e-06 |
| AAGGGGGCCGTGGGCTGCGGGAATAAGCTTTATGACCCAC | 1 | 4.68367e-06 |
| AAGGGGGCGCACCGCGTACGCGGGTAATGGGTGACTGTGG | 1 | 4.68367e-06 |
| AAGGGGGCGTGGCGTGTCTATCCGGACAGCCTGTGTGTGG | 1 | 4.68367e-06 |
| AAGGGGGCGTGTCGTAGCACGACCGGAACTGGAGAGGGTC | 1 | 4.68367e-06 |
| AAGGGGGGATATATATGTTTGGCTGTGGCGGTCCGTGGAA | 1 | 4.68367e-06 |
| AAGGGGGGCGAGAAAGACCGGTGGGGTGAGATGGTTTGAT | 1 | 4.68367e-06 |
| AAGGGGGGGCGCTTATGAGTCGTGGGGGACTTGGTTTGGG | 1 | 4.68367e-06 |
| AAGGGGGGGGCCACGAGTGGGCGAGGCTAGGTAGGCTCTG | 1 | 4.68367e-06 |
| AAGGGGGGGTGCGTGACGTCTCGGGCCGTTCGGCTGGGAA | 1 | 4.68367e-06 |
| AAGGGGGGTAGAGGGGAGACCGGGTAGCTAGTCGCGTGTG | 1 | 4.68367e-06 |
| AAGGGGGGTCTGTGGAGTGGGAGCACGTGAAAGTATAGGG | 1 | 4.68367e-06 |
| AAGGGGGTGAGAGTGTCTCCCTTTGACGCGAGCACACTGG | 1 | 4.68367e-06 |
| AAGGGGGTGCGGCGTGGGCGCATAGTGGGTGGCGACAGTT | 1 | 4.68367e-06 |
| AAGGGGGTGGGTAGAGGGCCTACGTTGTGTGGACTGGTGT | 1 | 4.68367e-06 |
| AAGGGGGTGGTAGCGTGCCAGCGGTTGGGGGTACGTGTCA | 1 | 4.68367e-06 |
| AAGGGGGTGTCGTGGGATAATTGCCCGAATTCGGTGTTCG | 1 | 4.68367e-06 |
| AAGGGGGTGTGGGGCCTGGGAAGATCTCCCGAGTGGAAGT | 1 | 4.68367e-06 |
| AAGGGGGTTAATGCCGTGGAAGACGAGTACCACTCGGGGC | 1 | 4.68367e-06 |
| AAGGGGGTTCGCGCGTGGAACTCGCTGTGTGCCGTGTAAG | 1 | 4.68367e-06 |
| AAGGGGGTTTCCGTGGGATGCGTGGCGAAGTCCCCTACTT | 1 | 4.68367e-06 |
| AAGGGGTAAGCCTGTGAGGGCGCGGCGCGCATGCGGACTC | 1 | 4.68367e-06 |
| AAGGGGTACCTTCTGTTACACGAGTGGAGTGGGAGTGGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.