These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGGGTAGCGGCCCGTTCCGTCCCACGCGGGTGTGAAGG | 1 | 4.68367e-06 |
| AAGGGGTAGGGCCGTATGGGGACTTTCCACAGCACGTGGA | 1 | 4.68367e-06 |
| AAGGGGTCATGCGTGACGCCTGGGGTGGCTTTGATATCCA | 1 | 4.68367e-06 |
| AAGGGGTCCGTCTAAGCCGCTAGTTGGCGGTTTGGTGGTT | 1 | 4.68367e-06 |
| AAGGGGTCGGGTGGGGCGCGTGGGTTATTCAATATGTCTA | 1 | 4.68367e-06 |
| AAGGGGTCTACGAAATTCTCGCGTGTGCTAAGGTAGGGCT | 1 | 4.68367e-06 |
| AAGGGGTCTCACGGGGCTCGGAGTGATGTCACGCTGTGAC | 1 | 4.68367e-06 |
| AAGGGGTGCGTGGGGAAGTGGGGAGGCGGGCCTCAGCCCA | 1 | 4.68367e-06 |
| AAGGGGTGGAGTGGTACACCGTGGTGTAACGGGATTGCCA | 1 | 4.68367e-06 |
| AAGGGGTGGCAAGTGGTGATGAAGCTCGCCCTCCTTGGGC | 1 | 4.68367e-06 |
| AAGGGGTGGCACTTGTGGTCATCCTGTGGGAGGACGAACA | 1 | 4.68367e-06 |
| AAGGGGTGTCAGTGCGAGACACGCGATGTTGATGGGGTTC | 1 | 4.68367e-06 |
| AAGGGGTGTCGGTGGGGTATTGTTGGGGCGCCAGGCGGGT | 1 | 4.68367e-06 |
| AAGGGGTGTCGTGAGACCCTACGATGCGTGGCGTGGCGCA | 1 | 4.68367e-06 |
| AAGGGGTTCCACTCCCTCTGGCGCCCGCCTATGACTCCCA | 1 | 4.68367e-06 |
| AAGGGGTTCGGAGGGTAATCTGTCCACGCGGTCCACGGCC | 1 | 4.68367e-06 |
| AAGGGGTTCGTGGGAGCGCGGTATCTTAAGTGACATTATT | 1 | 4.68367e-06 |
| AAGGGTAAGTGTGGTCGTGGGGTTTGACGTTCCCTATTAG | 1 | 4.68367e-06 |
| AAGGGTACCATGAGGAAGTGTGCATTAATCTTGAAGTAGG | 1 | 4.68367e-06 |
| AAGGGTACGACAGACCGAGGCTCACAATTACGTGGAGGGT | 1 | 4.68367e-06 |
| AAGGGTACGCGTTAAGTAGTTGAATCACGCGTGAGGTCCA | 1 | 4.68367e-06 |
| AAGGGTACTCGGCCTGTAGTGGGGCATTTCTGCGTGGCGC | 1 | 4.68367e-06 |
| AAGGGTAGGTAAACGTGTCAGGTTAGGTGGCGCACTCTTT | 1 | 4.68367e-06 |
| AAGGGTATATCCACAGTTCACCGTTAGCCGTGGGAAGGTA | 1 | 4.68367e-06 |
| AAGGGTATGACCATCTGTGGGCGTGGGCGTGTAGGACATC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.