These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGTAGTGGAGGTAGTGGCACATGCTAGTACACGAGTGG | 1 | 4.68367e-06 |
| AAGGTAGTGGGACTCGACACGCGCGTGGGGTCGTGATCAG | 1 | 4.68367e-06 |
| AAGGTAGTGTTGAACTCTGGAATTATAGTTAGCTGCGTGG | 1 | 4.68367e-06 |
| AAGGTATATACGTATTGTCTCGCGTGACGTGGGCGAACTC | 1 | 4.68367e-06 |
| AAGGTATCCACGGGCGACCTGTCGACCTTCGGTAGAGGGA | 1 | 4.68367e-06 |
| AAGGTATCGCGGCGGGGTCCGGGCGTTGCGCTTGGACCGG | 1 | 4.68367e-06 |
| AAGGTATCTGAAGTGGGGAAGTGGAGGTTTGAGGTACATG | 1 | 4.68367e-06 |
| AAGGTATGTCCCACGCGTACACGGGAGCTCTGATGTAGCT | 1 | 4.68367e-06 |
| AAGGTATTTGTCACATGCTCCGGTTATGTTCGCGTGGCAC | 1 | 4.68367e-06 |
| AAGGTCAAGGGGTACGGTTGGGAGTATCGTGGGAGTCGAC | 1 | 4.68367e-06 |
| AAGGTCAAGTCAGGATCTGTGTGGGGTCGTGGGAGTCCCA | 1 | 4.68367e-06 |
| AAGGTCACATGTGGAAGCGATCTCCCGATCCGAGTGCGCA | 1 | 4.68367e-06 |
| AAGGTCACGGGAACTGAGGGATTTCCGTGGATGGCTATGA | 1 | 4.68367e-06 |
| AAGGTCACGTGGTGTACGGGGGCTGGGCAGCCACGGCACG | 1 | 4.68367e-06 |
| AAGGTCAGGGCGGCAGTGCCCCACTAGGTCTGGTACGGGT | 1 | 4.68367e-06 |
| AAGGTCAGGTCGTACATACCGGAGGTGGCAGGGGCGTCGA | 1 | 4.68367e-06 |
| AAGGTCATGAAACCCAGGTAAGCGCTCGTAATCTTGGCCA | 1 | 4.68367e-06 |
| AAGGTCATGAGTGGATCACGCGGTGGGGGCGATTAAGCGT | 1 | 4.68367e-06 |
| AAGGTCATGGTCAGAGACGGTTCGTGTTTGGTGCCGTGGT | 1 | 4.68367e-06 |
| AAGGTCATGTGTGACCACCGCGAGGTAACTGCCGTGAATT | 1 | 4.68367e-06 |
| AAGGTCATTCCACCGCTGGTTCGCGTGGGGCCTGGCTGCA | 1 | 4.68367e-06 |
| AAGGTCCAATGTCGGTTTGCACATCCGTGGGAAGGAGCAG | 1 | 4.68367e-06 |
| AAGGTCCACGCGTGTGTGTGAGTGGGTGCAGCCGTCTAAG | 1 | 4.68367e-06 |
| AAGGTCCAGTGAGAGAAACACGCATGGTAGTTCCGTGGAA | 1 | 4.68367e-06 |
| AAGGTCCCGCGTGGAGCCTTGGCCTTTGGTAAACATTGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.