These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGTCCCTCATTTAAGAGAATAGCCGTGGATTTCTGATC | 1 | 4.68367e-06 |
| AAGGTCCCTGGGTATATTATGCGCCGTGGAAGCTCAAGCC | 1 | 4.68367e-06 |
| AAGGTCCGAAAAGTACATGACCTTGTTATTCAAGGCGATA | 1 | 4.68367e-06 |
| AAGGTCCGATGGCCCTGTGGATTTTCAAGGGCGCGTGGGC | 1 | 4.68367e-06 |
| AAGGTCCGTTGCGATTTGCAAGTAGCGACAAGGACCCTGA | 1 | 4.68367e-06 |
| AAGGTCCTCTTGGAGGGTCGAAGCCGTGCCACGCGTGGCA | 1 | 4.68367e-06 |
| AAGGTCGCATTGGGTGTAACGTTGTGGGCGGGGTTAGGAG | 1 | 4.68367e-06 |
| AAGGTCGCCGTGGGAGGCTTACCGTGTCGAAACGAATTAG | 2 | 9.36733e-06 |
| AAGGTCGCGCTTCCGAGTGCGTGGAAATGGGCGTACCAAA | 1 | 4.68367e-06 |
| AAGGTCGCGTCGGGATTCGAGTGGTCATTTGGCGTGGGCG | 1 | 4.68367e-06 |
| AAGGTCGGCGGCTTAATGGAATATAGTGGTAGGCTTGTTA | 1 | 4.68367e-06 |
| AAGGTCGTGGATTGTGGTACCTCAATGTAGCGGGAGTGGA | 1 | 4.68367e-06 |
| AAGGTCGTGGGGCGGTTAGACGAGGATCGTGGAAATTGCC | 1 | 4.68367e-06 |
| AAGGTCGTGTTAGCCGGAGTGGGTTCCGTTGTCATGCAGC | 1 | 4.68367e-06 |
| AAGGTCTAAGATCCTGTATCTCCAGCCGTGGGCGCGATGT | 1 | 4.68367e-06 |
| AAGGTCTCGACAGAAGGCGAGGTTGTGAGTTGGCGACGGA | 1 | 4.68367e-06 |
| AAGGTCTCGTTCGCAGTGTCACGTGGGAACTGGGAGTTCG | 1 | 4.68367e-06 |
| AAGGTCTGAATTGCGTGGGTACTTGTGGCGAGGGGGTGCA | 1 | 4.68367e-06 |
| AAGGTCTGCGCGTGGTAGACGGGCGGCTACTGGGCATGTC | 1 | 4.68367e-06 |
| AAGGTCTGCGTCCTCGGGACGTGGAGGTGGCTGAGTCGTA | 1 | 4.68367e-06 |
| AAGGTCTGCTGCCCAGCACCTTGGAGTAAGGGGCCATGGG | 1 | 4.68367e-06 |
| AAGGTCTGTGTCAGAGGGGCCTGGGGGAGGTCCCACGCGC | 1 | 4.68367e-06 |
| AAGGTCTTGGGTGGGAATCACGCGTGCAACGTGTGGAGTA | 1 | 4.68367e-06 |
| AAGGTCTTTATTTTCCGTTGTCCATGTGTGCCAATTCGTG | 1 | 4.68367e-06 |
| AAGGTGAACCCAACTCCTGCTCGCGGATAAGTTGGACGGT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.