These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGTGGACCAGCAGAAGTCGTGGGTGGTGCGTGGGGAGG | 1 | 4.68367e-06 |
| AAGGTGGAGTGTCGCGTGGGTTTTCGTGGGAGGGTCGGAG | 1 | 4.68367e-06 |
| AAGGTGGATTAAGTTGGGCGGGCGGCGAAAAAGTCCGTGA | 1 | 4.68367e-06 |
| AAGGTGGCATCAGGCACGAGACCCATATAGCTGAAGGCTA | 1 | 4.68367e-06 |
| AAGGTGGCGATCGGGGTCCACGTGGCGTCGTGCACCTTCT | 1 | 4.68367e-06 |
| AAGGTGGCGGCTCTTCGGCAGATGCGTGGCACGAAAGGCA | 1 | 4.68367e-06 |
| AAGGTGGCTCTAAACCGTTGGTGGTGTGGGAGAGTTGCGT | 1 | 4.68367e-06 |
| AAGGTGGGCCGCGTAAGAGCCATATAAGGCGTGGGGGGAC | 1 | 4.68367e-06 |
| AAGGTGGGGAGGAGTGAAGGTGTGGGACACTTGGTGGGAT | 1 | 4.68367e-06 |
| AAGGTGGGGAGGGGGGCGCCCTAGGTGGGTACGGAGAGTA | 1 | 4.68367e-06 |
| AAGGTGGGGTCATGTCGGAGGGTGAGCACGACGACCGAGG | 1 | 4.68367e-06 |
| AAGGTGGGTTTTGTTCGGGGCGCGTGGCGGCCGCGGAGGG | 1 | 4.68367e-06 |
| AAGGTGGTAAGGTGACGGTTGTCGTTCATCGTGGAGGGGC | 1 | 4.68367e-06 |
| AAGGTGGTCAGTGGGTGTGGGCCTTTCGTGACGGGGGCTT | 1 | 4.68367e-06 |
| AAGGTGGTGGGTACGGGGGGCGGTAGCGGGTGCTCACGGG | 1 | 4.68367e-06 |
| AAGGTGTACGGTGGGCGTGGATTCACTGCCGTGGCTTGCT | 1 | 4.68367e-06 |
| AAGGTGTCCCGTACGGATCAGACCTGCGTGGGTGTCACTG | 1 | 4.68367e-06 |
| AAGGTGTCTGCTTGGGGGGAGAGACGGATGTTGCGTGAAA | 1 | 4.68367e-06 |
| AAGGTGTGATCTGTACCACCATCGTGGGGCGGCCGTCCTA | 1 | 4.68367e-06 |
| AAGGTGTGCGGAGCCTGACACGCGTGCGTGTACCTGAGCA | 1 | 4.68367e-06 |
| AAGGTGTGCGTGGGGTACCTGTGGTAAGGTCGGACTAGCA | 1 | 4.68367e-06 |
| AAGGTGTGCTTGTTTGCGTGGGAGCCGTTTCCAGGTGGAG | 1 | 4.68367e-06 |
| AAGGTGTGGACAGTGTCCACGGTGAAGTGGCGGCGAATGC | 1 | 4.68367e-06 |
| AAGGTGTGGACTTGTGGTTGGGGGGCGTGGATTCGACCCA | 1 | 4.68367e-06 |
| AAGGTGTGGAGTGGGTTGTGGCTAGGAATGGGCACACGCG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.