These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGTGTGGGAATCTGGTAGGAGTGGGCGGGAGAGAACAC | 1 | 4.68367e-06 |
| AAGGTGTGGGGCGTTGTGCGTGGTGGATGGCGGTGTGAGC | 1 | 4.68367e-06 |
| AAGGTGTGTAATTAGTCGGCGTGGGGAATAGTGGGCAGGA | 1 | 4.68367e-06 |
| AAGGTGTGTTCCGAGAGCGCGGAAGGTTCATGTGGGCCGC | 1 | 4.68367e-06 |
| AAGGTGTGTTGAGGGATGTGCGTTTAGTCCACGGGGTGCG | 1 | 4.68367e-06 |
| AAGGTGTTCACTCAGGAAATCACGTATGTTACACGTGGGT | 1 | 4.68367e-06 |
| AAGGTGTTGCTAGAGGCGTAAAATATAGGCTTTGGAACGA | 1 | 4.68367e-06 |
| AAGGTGTTGGGCGAGAGGCAGTCCTCGTGGCTCCGTGGTA | 1 | 4.68367e-06 |
| AAGGTGTTTGAGCTCTCCAGCCGGGTACAGAGGGGACTGG | 1 | 4.68367e-06 |
| AAGGTTAAGCGTGCAAGGTGTCCTCAGTTCGTAGATTGGA | 1 | 4.68367e-06 |
| AAGGTTAAGGTGGGGTATCGTGACTATGCATCGTGGGAGG | 1 | 4.68367e-06 |
| AAGGTTAAGTGAATCGCCGTTCAACGCGGCGGGAATCTGA | 1 | 4.68367e-06 |
| AAGGTTACTCGTGCGTGACTTTTGATAGCGTGGGGCGGTC | 1 | 4.68367e-06 |
| AAGGTTAGAAGAAAAGGTGTGAGGCTATTTGTGGTCGATC | 1 | 4.68367e-06 |
| AAGGTTAGGACGGAAGTGGGTCAACATTCCCGTAAGGTAA | 1 | 4.68367e-06 |
| AAGGTTCAGAAGGTAGGTAGTTCGGCATGATGGCATAAGA | 1 | 4.68367e-06 |
| AAGGTTCAGGACTGGTCGCGTTCGAGTGGGTGGGAGCATC | 1 | 4.68367e-06 |
| AAGGTTCATCGGAGCGTCGGTTGCTGTCGGTGTGTAAGTT | 1 | 4.68367e-06 |
| AAGGTTCCTGCGTGGGCAGGCAAGGACGGTAGCGGACGGG | 1 | 4.68367e-06 |
| AAGGTTCCTTAACTGTTCGATGGCGTCGACTCGTTCGAGG | 1 | 4.68367e-06 |
| AAGGTTCGAAGGATAATAAATGTAGAAGAGGTGTGAAGTC | 1 | 4.68367e-06 |
| AAGGTTCGCCACGAGCTCACGTGGAGTGTGCGCATACTTG | 1 | 4.68367e-06 |
| AAGGTTCGCGGAATTTGGTGAGTGTGCTACGTGGGAAATG | 1 | 4.68367e-06 |
| AAGGTTCGGTGCGTGGGGGCGGGGTCTGACGCTATCCTCG | 1 | 4.68367e-06 |
| AAGGTTCGTAGGTGTATGTGTGTAATACGAGTTATGTGGT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.