These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGGTTCTCCTCGTGGCGTGGTGAGTTGTGGGTAGAGGGA | 1 | 4.68367e-06 |
| AAGGTTCTCGTCCCACGGGACATTGCTTAGCGTGGGGCCA | 1 | 4.68367e-06 |
| AAGGTTCTCGTGGGGGCGTGGGGGGTGTAAGTTATGGCAG | 1 | 4.68367e-06 |
| AAGGTTCTGTCGTCTGGGGAGCGATTTCGCGCGTGGGCTT | 1 | 4.68367e-06 |
| AAGGTTCTTCACGGCGCGGAGAACAAGCCTTAACACCACG | 1 | 4.68367e-06 |
| AAGGTTGACGTACCAGTGGAAATGGATAGATGGCAGGATG | 1 | 4.68367e-06 |
| AAGGTTGATGTGGATTTGTCTAGTGTTATCGTGGGAAAGT | 1 | 4.68367e-06 |
| AAGGTTGCGTGATTACATTGAGCCTAACAACCGTGGGAGC | 1 | 4.68367e-06 |
| AAGGTTGCGTGGGGGAGGTGTGGCGTACGTGGAGGACCTG | 1 | 4.68367e-06 |
| AAGGTTGGACAGCTAATGCCGTATGGGATTCCGGGGCCGA | 1 | 4.68367e-06 |
| AAGGTTGGCGGTTTCGATGTGCTCCACGCGCATAGATATG | 1 | 4.68367e-06 |
| AAGGTTGGGCACGTGTCGCGTGTCAAGCAGTTTCACGCCC | 1 | 4.68367e-06 |
| AAGGTTGTCAGGGGTTGTGCCTCTGACTCGGAGATGTAGC | 1 | 4.68367e-06 |
| AAGGTTGTCATGAAAAGGTAAACCTAGTGCTGCCCCCCAT | 1 | 4.68367e-06 |
| AAGGTTTAGCAGCGCGTGGCGGTGTCCGTCGTGGGCATGG | 1 | 4.68367e-06 |
| AAGGTTTCACGCGTGTCAAACTCTCGTGTCTACACTTACG | 1 | 4.68367e-06 |
| AAGGTTTCCTAGCGAGCTGACCACCCATGTGTTAAGTGGG | 1 | 4.68367e-06 |
| AAGGTTTCGCGGCTAAGATGTGCGCTAATGAGCCCACGCC | 1 | 4.68367e-06 |
| AAGGTTTCGGTATGCGTGGGAAATAGGCGTGGATTGGCGA | 1 | 4.68367e-06 |
| AAGGTTTCGTGTCGTGGACCAGGAGCCAAGTATGGGACGT | 1 | 4.68367e-06 |
| AAGGTTTGATGCAGATGCACGGGCTCCGTGGGCGATTAGA | 1 | 4.68367e-06 |
| AAGGTTTGCTTCGTGGGGTAAGGGGTCGCGTGGGGCATTG | 1 | 4.68367e-06 |
| AAGGTTTGGAGTGGTGGACTTGCATCGTGAGTCACGCGTG | 1 | 4.68367e-06 |
| AAGGTTTGGGTGACCCCACGGACACACCACCTCATCACTC | 1 | 4.68367e-06 |
| AAGGTTTTAAAAGATTACATATCTGTTGATCATTTTGTAG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.