These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTAGGGCCGTGGGCGGCGATGGCCGTGGGCATCGATAC | 1 | 4.68367e-06 |
| AAGTAGGGGACGGAAATCAAATTAGGCATGGTCGGAGTCG | 1 | 4.68367e-06 |
| AAGTAGGGGCGGCTGGTTGCGGTTGCGTGGGCGTGTGGCC | 1 | 4.68367e-06 |
| AAGTAGGGGCTCAGGGATAGTGGGGCGTCGTTTGGCCCGG | 1 | 4.68367e-06 |
| AAGTAGGGTCACGCGGAAGGGGGAGCGTGGGACTAAGAGT | 1 | 4.68367e-06 |
| AAGTAGGTGGGAGGTTTAGCGTGGACGTGGGGCCGTGGTT | 1 | 4.68367e-06 |
| AAGTAGGTTAGCCGTGGACCGTTGTTCGCGTGGGCGTTGG | 1 | 4.68367e-06 |
| AAGTAGGTTCGTCCACGCGGATCGAGGGTAGGGGCGTGGC | 1 | 4.68367e-06 |
| AAGTAGTAGGGCGGGTTACTGTAGCGTTCCGTCGGGAGCG | 1 | 4.68367e-06 |
| AAGTAGTAGTCAGGTTGGGAGAGAGACGTTTCCGGTATTA | 1 | 4.68367e-06 |
| AAGTAGTCAATGACCCACTCCAATACCGTCCGTGGACATG | 1 | 4.68367e-06 |
| AAGTAGTCCTAGGAAGCGTGGTGTGCCGTGGTGTGTGTAG | 1 | 4.68367e-06 |
| AAGTAGTCGCGTGTGGCTATCGGCACAGTGGGAGCGTGGG | 1 | 4.68367e-06 |
| AAGTAGTCTCCATTGTACTATCATCCACGAGAACGGTTGG | 1 | 4.68367e-06 |
| AAGTAGTGAGTCATCGTGGGTGGAAGATGGAGTGCGTGCA | 1 | 4.68367e-06 |
| AAGTAGTGGAAAATACGTGGCTTTTGAAGCTTCCACGGTG | 1 | 4.68367e-06 |
| AAGTAGTGGATTGGCGTTCATGACGTCTCACCGTGGCCAA | 1 | 4.68367e-06 |
| AAGTAGTGGCGCGATGTTGGCGGCCGTGGGAAGCCCGTGA | 1 | 4.68367e-06 |
| AAGTAGTGGGCCGCGGAACTTGTGGGTGTCTTTGTGGATT | 1 | 4.68367e-06 |
| AAGTAGTGGGCGTCAACTTAGCGCTTGGGGTGGAATTCAC | 1 | 4.68367e-06 |
| AAGTAGTGGGGTATGACGGTCCACTCGACGTGGCGCTCCG | 1 | 4.68367e-06 |
| AAGTAGTGTACCTGAGTGTCTGTCCTGCCAAATGGAGTGG | 1 | 4.68367e-06 |
| AAGTAGTGTGAGGGCGATACGTGCGCGGGCTCCTTGTTGT | 2 | 9.36733e-06 |
| AAGTAGTTAAGTCGTATTAGCACGTGGGTTGCGAGCGTCA | 1 | 4.68367e-06 |
| AAGTAGTTCGCGAGGGCGGCGCGTGGGGTCGTTTGGGGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.