These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTAGTTCGTGGGAATGGCATGAGGGGTCAGTGGGCAGG | 1 | 4.68367e-06 |
| AAGTAGTTGGGGAGGATCGCGGGTGGATGCATGTGCCACG | 1 | 4.68367e-06 |
| AAGTAGTTTGCGTGGACTTGCTCCATGTGGGCTGGAGTGA | 1 | 4.68367e-06 |
| AAGTATAACACGCGTGGTCTTGTGGGAGCAGGAGGCTACG | 1 | 4.68367e-06 |
| AAGTATACGTGGAATTCCCCGATGTTTACAGAACAGCGGC | 1 | 4.68367e-06 |
| AAGTATACTAAGCTCTACCACGCGTGGGTAGCCATAGTCG | 1 | 4.68367e-06 |
| AAGTATAGGAGGGTGGGCACTGACACGGGCGTGGGATGGA | 1 | 4.68367e-06 |
| AAGTATAGGGTGCGTGGGAATGTGGGGTACGAGGTATGCA | 1 | 4.68367e-06 |
| AAGTATATATGGAGTTTGGTCAGTGCAAGACTTTCCAGAA | 1 | 4.68367e-06 |
| AAGTATCATGATGTTAGGACAATGCGTGATACGCCTTTGT | 1 | 4.68367e-06 |
| AAGTATCGCAAACGAGCGTGGAGGGGCTGCCTCGTCGCGA | 1 | 4.68367e-06 |
| AAGTATCGCAGGTGCCTTTCGTGGGGCGCGTGGAGACGTT | 1 | 4.68367e-06 |
| AAGTATCTCAGAGGACTACGAGAGACAGTGGTCGCCTATG | 1 | 4.68367e-06 |
| AAGTATCTCGGGACCAGCGTGCGACGTCACGCGTGTTCGG | 2 | 9.36733e-06 |
| AAGTATGACATGCTACCGTATTCGTGGGAACTGATTAGGC | 1 | 4.68367e-06 |
| AAGTATGATGGGGCCGGAAAACCACGTCACGTGTCATTGC | 1 | 4.68367e-06 |
| AAGTATGCGGTCCACGCAAATACGTCTTATGGTGCCTGGC | 1 | 4.68367e-06 |
| AAGTATGGCACGATTAACCTTGCGGGGGGTCAATTGATTT | 1 | 4.68367e-06 |
| AAGTATGGCTATGGTTTTGGTACGGGTCGCGTGGACGAGC | 1 | 4.68367e-06 |
| AAGTATGTACGTAACGGCTGTAGGGTAATTCGGGCAAGTC | 1 | 4.68367e-06 |
| AAGTATGTGGAGGTGAGCGTGGGTGGAGTCTCCACTGTGT | 1 | 4.68367e-06 |
| AAGTATGTGGTAGGGGGTGGCGTGGGTGCGCGCGTGGTTA | 1 | 4.68367e-06 |
| AAGTATGTTTTGACCTGCATATTAAGTGTGTGCAGTCACG | 1 | 4.68367e-06 |
| AAGTATTTGTGGACGAAACACATTGCGTGGGTCTTTTACA | 1 | 4.68367e-06 |
| AAGTCAACCCACGCGGATTCCCCACTAATGTTGACGCGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.