These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTCAACGGACCCCTGGTGCGTCACGCACATGGACAAGA | 1 | 4.68367e-06 |
| AAGTCAAGTGGAGCGTGGGTCCAAGGCAGGTAAGCGTCCG | 1 | 4.68367e-06 |
| AAGTCAAGTGGGTCTACACTGGCGTAGTGCTTAGGAGTGA | 1 | 4.68367e-06 |
| AAGTCAATGCGACCGCGTCGTCACTATGAGATGTAGGCGG | 1 | 4.68367e-06 |
| AAGTCACAGCTCCTGCGGTGAAGGGGTGCGTGGATGCGGA | 1 | 4.68367e-06 |
| AAGTCACATCACGGCACGCAAGATGTGTCGTGGACTCATA | 1 | 4.68367e-06 |
| AAGTCACCCCCGTGGGTGGTTTGGCAAGTACTCGAATTTT | 1 | 4.68367e-06 |
| AAGTCACCGGAAAGGGAGGGTTCCGTGAGTCTCATTGGAA | 1 | 4.68367e-06 |
| AAGTCACGCACAGGAGGCAAGAGTCGGGTGCCGTGGGGGG | 1 | 4.68367e-06 |
| AAGTCACGTAGGATCTACGTGCCAAAGCCTGCTGGTGGGT | 1 | 4.68367e-06 |
| AAGTCACGTGGATCAGGGCTCGCGGCTCGCGTGGGGTTAT | 1 | 4.68367e-06 |
| AAGTCAGGGCCTCCACGGACAGTTGCGTGATGGTGGAGTG | 1 | 4.68367e-06 |
| AAGTCAGTGGAGGGTCAAGCAGTATGGTCGCGAGACCGTG | 1 | 4.68367e-06 |
| AAGTCAGTGTGGATTTGGTAAGCCGCGTTCGTGGCGTGGA | 1 | 4.68367e-06 |
| AAGTCATAGAAAATCACGACCCGTGGGGTGGTACACCCCC | 1 | 4.68367e-06 |
| AAGTCATAGTCGTATGACCAGGGATCGTATGGCGTGGGGC | 1 | 4.68367e-06 |
| AAGTCATATCTACGTTCTTGTAGTTTGCAACCCACGTTAA | 1 | 4.68367e-06 |
| AAGTCATCGGGCCGGCTCACAACAGTTCATCCTGACTTCA | 1 | 4.68367e-06 |
| AAGTCATGATGTGTGACTTTGAGTAAAGTGGTCCTGGCGA | 1 | 4.68367e-06 |
| AAGTCATGCGTGGGTTTGGCAGTGGACTTGTAGGTTCTCT | 1 | 4.68367e-06 |
| AAGTCATGGTGTGAGCTGCGGTTGGACCGTCGTCTAGACG | 2 | 9.36733e-06 |
| AAGTCATGTAGATGCTGCAGCCAATAGAGGGGGTGTCACG | 1 | 4.68367e-06 |
| AAGTCATTGGTGAAAAATGTCGATATTGATGAGAGTTGTC | 1 | 4.68367e-06 |
| AAGTCATTGTTTGACGTGTATCACTGGCGCAGTGTGGGAG | 1 | 4.68367e-06 |
| AAGTCCAAACGTTGAGTTAGAAGGGGGCATGACTGACGCT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.