These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTGTTGAGTGGCGTGATCCGTGCGAATTTCATGTGTTC | 2 | 9.36733e-06 |
| AAGTGTTGAGTGGGGAGTTTGCGCGCGCGTGATTAACCGG | 1 | 4.68367e-06 |
| AAGTGTTGCGTGGTAATACGTGGGAACGTGGAGTATAGCA | 1 | 4.68367e-06 |
| AAGTGTTGGGCGCGACGGTGTAAGCGACGTGTGTTGGGCG | 2 | 9.36733e-06 |
| AAGTGTTTAAACACGCGTGTTGCGTGGTCTGAGTTGTGGA | 1 | 4.68367e-06 |
| AAGTGTTTCAGGGTGCCACTAGTAACAAGTGGGTGCTCCA | 1 | 4.68367e-06 |
| AAGTGTTTCTGAGCGATTTCGCGTTGCAGTGCGTAGGTGT | 1 | 4.68367e-06 |
| AAGTGTTTTTAGCCCACGGCACGGATTCAACAATCGTGAA | 1 | 4.68367e-06 |
| AAGTTAAGGGACAAGATATATGCACAGGTGTAGACGGTGT | 1 | 4.68367e-06 |
| AAGTTAATCCACGATAGACTAGGGGAGAGTGGGCTATCCG | 1 | 4.68367e-06 |
| AAGTTACCCCGTATGGAGACGCGACGGCACGTTGCGGGGG | 1 | 4.68367e-06 |
| AAGTTACGAGGGTCGTTCGAGTGAGTGCCCACGGGGTACA | 1 | 4.68367e-06 |
| AAGTTACGCACGTGGCTCACTCTGCTAGTGAGGTCAGCTA | 1 | 4.68367e-06 |
| AAGTTACTTTCATAAAGTAATAGGTGAGTGGACCGTGGGC | 1 | 4.68367e-06 |
| AAGTTAGAAACCTTGTTTTGAGGCGTGGGAGGAACGTAAC | 1 | 4.68367e-06 |
| AAGTTAGAGTGGGGTCTGCCGTGGTTCCGTGGGCGGACAG | 1 | 4.68367e-06 |
| AAGTTAGGCAGGCCGTGGACGTGGGTGCCTTGCGTGATCA | 1 | 4.68367e-06 |
| AAGTTAGGGTGTTCGGCGGGGCGAAGTCCTTGATTGGGGT | 1 | 4.68367e-06 |
| AAGTTAGTATCGGCTAGGACGGTGATGCGTTCGCGTGGAA | 1 | 4.68367e-06 |
| AAGTTAGTGGGCCGGTGCTGGAGTGGTTGTGGCTAGCCTG | 1 | 4.68367e-06 |
| AAGTTATATCGCCTCAGTTTGTCCATCGGTAGTGACCTGA | 1 | 4.68367e-06 |
| AAGTTATATTTCTTGTACGCACAGAATGTTGTCGTGGATC | 1 | 4.68367e-06 |
| AAGTTATTAGTGGAAGTCGTCGTCAGGAGAGCTTCGTGTA | 1 | 4.68367e-06 |
| AAGTTATTCGTGGCCGGTCACGCGTGACGCTTCTTGACTC | 1 | 4.68367e-06 |
| AAGTTCAAGAGCAAGAAAGGGAGAAATAGTAGGTTCCACT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.