These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTTCAATCTACACCCTTGTGGTTGAATTAGCATTGGCA | 1 | 4.68367e-06 |
| AAGTTCACAATGAAGGTGACCTTGAGCGTGGAAGTTTTCA | 1 | 4.68367e-06 |
| AAGTTCACCAAGGTATGCGAGTGGGGGGTTTCGGAATGCG | 1 | 4.68367e-06 |
| AAGTTCACGGAGTGGGACTGGTCCATAGGAGCCCAGGATG | 1 | 4.68367e-06 |
| AAGTTCACGGGAGACGTGGTTTTCGTGGGTTTTGTCTGGG | 1 | 4.68367e-06 |
| AAGTTCACTCCATGTGTTCGTGGGCCGTGGATTCGCTATT | 1 | 4.68367e-06 |
| AAGTTCAGCGTGGGTCGCCTCTGAGTGGGGCTGAGATCTC | 1 | 4.68367e-06 |
| AAGTTCAGGGCGTATCATACCAGCTGCAGAGCCTGGGTCC | 1 | 4.68367e-06 |
| AAGTTCAGTGTGGGTGATGGTGTTTCGGTCTAGGATCACG | 1 | 4.68367e-06 |
| AAGTTCATTGCCGTGGGGTGAATAGCGTGTTCGTGGCCAG | 1 | 4.68367e-06 |
| AAGTTCCACCAGGCTCACGGCTGAAGATACTGGTCGGACG | 1 | 4.68367e-06 |
| AAGTTCCACGAGTGGGGTAAAGGATTAGGATCCCCAGCAC | 1 | 4.68367e-06 |
| AAGTTCCACGCAAGTGCGAAGGTCGCGAGACGGGCCAGGA | 1 | 4.68367e-06 |
| AAGTTCCACTACATCCCTGCACAACATAGTGGCGTGACTT | 1 | 4.68367e-06 |
| AAGTTCCCCACTACCTATCGGTGCACGCCACCGTGGGCGC | 1 | 4.68367e-06 |
| AAGTTCGACCCAGGGGGCACGGGCTTTTAGTGGGAGGAGC | 1 | 4.68367e-06 |
| AAGTTCGATTCTTGCGCAGTGAGGAAACGATTCGTGGGTT | 1 | 4.68367e-06 |
| AAGTTCGCGCGTGGGGCCGTGTGGTTCAGTGAGGTCGCTT | 1 | 4.68367e-06 |
| AAGTTCGGCCAGAAGGGCTAGACGCGTGACATGTTGGAGT | 1 | 4.68367e-06 |
| AAGTTCGGCCTGAGCGTGGGGTAAAAAAAAGGGGGGATCT | 1 | 4.68367e-06 |
| AAGTTCGTAAACTGTTACGAAGCTCGTTAACGCGTTCGCG | 1 | 4.68367e-06 |
| AAGTTCGTCACGAGTGGTTAACTGATGGGCGTGTTTTTGT | 1 | 4.68367e-06 |
| AAGTTCGTGGACATGGCGCCCACTCTGCAGGGATGCTTGA | 1 | 4.68367e-06 |
| AAGTTCGTTGTAGAGGGATAGGGGCAGTGGTTAGGTTGGC | 1 | 4.68367e-06 |
| AAGTTCTAAACGGACGATGACGTCGGAATCCTGCGTGGAC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.