These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTTGGATAGTGGGCGCAGGTGTACACAGTCTGGATAAC | 1 | 4.68367e-06 |
| AAGTTGGCGATCAAGGCCATATTGATGTGGCGCCCAGGCG | 1 | 4.68367e-06 |
| AAGTTGGCGTCACAGTTCCGTGTACGGCTCCGTGTGGAGC | 1 | 4.68367e-06 |
| AAGTTGGCGTGGAGTTAGTGATTGGCGTGATCCGAGGAGA | 1 | 4.68367e-06 |
| AAGTTGGGACTGCGGGGGTAGCGGTTGAGGAATGTGCGTG | 1 | 4.68367e-06 |
| AAGTTGGGAGGTCAGCCCGTTTCAACGGTTGTAACTACGG | 1 | 4.68367e-06 |
| AAGTTGGGCACTCGTGAAAATGAGGATGCCAACGCGTGAT | 1 | 4.68367e-06 |
| AAGTTGGGTTTGGGTGAGTTTGTATCTGTTCTTCCAATTA | 1 | 4.68367e-06 |
| AAGTTGGTCACCCACGCGCAATCTCAGTGGGGAGTGCGTC | 1 | 4.68367e-06 |
| AAGTTGGTGATGATACTTATCCACGAGTGGGGCTGTTGTT | 1 | 4.68367e-06 |
| AAGTTGGTGGGTGACGTATGGTGGGATTAGTGTGGGGGGC | 1 | 4.68367e-06 |
| AAGTTGGTTGCTCGGATGAACGTGCGTGGGTTTGCACTGA | 1 | 4.68367e-06 |
| AAGTTGTAACTGTCTCGGAATTTACACGAGTGAAAATGCG | 1 | 4.68367e-06 |
| AAGTTGTAGGGGCGTGGGTAGGAGTGGGTGGTTGGCACAG | 1 | 4.68367e-06 |
| AAGTTGTAGTTAGCCTGGAAGGGTGGGTTAAACGACGCGT | 1 | 4.68367e-06 |
| AAGTTGTCACGCTCAAGGTGTCCAGTAGGGTGGGCTAATC | 1 | 4.68367e-06 |
| AAGTTGTCGGCTTTCCACGTATGGGCTCTGCCGTGGATGA | 1 | 4.68367e-06 |
| AAGTTGTCTGTGGATTACGTGTTTTTGTGATGGACGCATC | 1 | 4.68367e-06 |
| AAGTTGTGGCACAGGGACACGCGTGGTCGCGGAATGAGTC | 1 | 4.68367e-06 |
| AAGTTGTGGGTACAACCGTGTACGGCGTGGGCCGCGTGTT | 1 | 4.68367e-06 |
| AAGTTGTGTCACGGGTAATCACGCTTGCGCACGACAAGGT | 1 | 4.68367e-06 |
| AAGTTGTGTGGAACTGTATCGTCCAACGTCTCGGACAATA | 1 | 4.68367e-06 |
| AAGTTGTGTTGTCGCGTGGAGGACCAGTGGGTGTCGACCG | 1 | 4.68367e-06 |
| AAGTTGTTAGCGGTCGTTACCGTGGAATGAGGGCGGACAC | 1 | 4.68367e-06 |
| AAGTTTACACGGTCTCTGAGAAAACACGTGGGAGCGGAGT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.