These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTTTAGGCAGGTCGTGGTGGCAGTGTAAAGGTGGCTTC | 1 | 4.68367e-06 |
| AAGTTTAGGCTTCCACAGTCACGATATTGCACCTAACGTA | 1 | 4.68367e-06 |
| AAGTTTAGGTCACCCTCCGCGGGAGCTGGGTGGTGATGGT | 1 | 4.68367e-06 |
| AAGTTTATTATGGAGACCTCCGCACGATCGAGTACACACG | 1 | 4.68367e-06 |
| AAGTTTCACAGTGGCATGTTCATCCAACCGTGGCCAATCT | 1 | 4.68367e-06 |
| AAGTTTCATGGTCAGGGACGACTGAAGTTCGTGGGAGGCT | 1 | 4.68367e-06 |
| AAGTTTCCACACTACGTGTACGTGCACATACACCCACGGG | 1 | 4.68367e-06 |
| AAGTTTCCTAGTTCTTAGTGGAAGGGGACGTGCGACGGGC | 1 | 4.68367e-06 |
| AAGTTTCGCGTGGGCCACAGGGTGGGGTCCCACAGCGACG | 1 | 4.68367e-06 |
| AAGTTTCGTTTATTCCGGATAGACGTCGTGCGCGAGGCCG | 1 | 4.68367e-06 |
| AAGTTTGAGTGGGTAGAAGCAACAACATGGGTGGGTGAAG | 1 | 4.68367e-06 |
| AAGTTTGATCCGTCGGCATAGGGAGGCGGTCTGTGGCATG | 1 | 4.68367e-06 |
| AAGTTTGATGTGGGCGTGTGTTTGTGGTGCCCAGGCATTA | 1 | 4.68367e-06 |
| AAGTTTGCAACACCACCAAGCGCTGCGTGGATGCGGGCGC | 1 | 4.68367e-06 |
| AAGTTTGGGGTGCGTGGGTACAGCAGTGGGGCGCTTGGGT | 1 | 4.68367e-06 |
| AAGTTTTAATTCTGTCGTGGGGTGAGTTGTCTCGATCCGC | 1 | 4.68367e-06 |
| AAGTTTTACCTATTCTTGTCCGTAGTGCGTGGGTCGTACT | 1 | 4.68367e-06 |
| AAGTTTTAGTTGTGTTGCGTGGGTTGTACGGTCCCGGCAA | 1 | 4.68367e-06 |
| AAGTTTTGCAGGACGTGGGGTTTTTCACGCTGTGAACGGG | 1 | 4.68367e-06 |
| AATAAAATCCGGTGTAGGTCAGGAAGTACCAAATAGTCAT | 1 | 4.68367e-06 |
| AATAAACACAGACATCCCGTTTGAGTGTGGGCGAGGGGTG | 1 | 4.68367e-06 |
| AATAAACCGGCCAGGTCCCTAAAATAGTGGTTGACCATAC | 1 | 4.68367e-06 |
| AATAAACTCGTAGGAATCCGTGGGGGCCAATCTGCGAGAT | 1 | 4.68367e-06 |
| AATAAAGACGAACGCTGAGCAGTGGAAGTTCCCTGCTAGT | 1 | 4.68367e-06 |
| AATAAAGGACCACACACGTTTACTCCCACGCATAAAAGAC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.