These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATACACGCGTGGGTGCGGTAGCGCGTGGGGACTGGTTGA | 1 | 4.68367e-06 |
| AATACACTCGTGGGGAACGTGGGTTGCAGCAATCCAGCGA | 1 | 4.68367e-06 |
| AATACACTGGAAGGTGTCTTTCGTGGGAAAGCTTGACAAG | 1 | 4.68367e-06 |
| AATACACTTTGGACCGACCTGGGCGAGAGAGAGTAACCGT | 1 | 4.68367e-06 |
| AATACAGAAGAGGTGCGTCGTATGAGACGGTAGGGAGCGT | 1 | 4.68367e-06 |
| AATACATTAAGTGGACGTGGATTATTGTCGCGCCAAACGT | 1 | 4.68367e-06 |
| AATACATTACACGGGGATGGCATGCGCGTGTGGGTGGTTT | 1 | 4.68367e-06 |
| AATACATTGCGTGGGTGTACATACTTTCCTGACTAATAGA | 1 | 4.68367e-06 |
| AATACCAACGGCACGCAATACTCGTGGGTTTTTTATGCGC | 1 | 4.68367e-06 |
| AATACCACGTGGCGTGTCTAGCGGTTAGGGGGGCGCCGCG | 1 | 4.68367e-06 |
| AATACCAGCGTGTAGTCAGCCTGCATGGAGCGAATTTATA | 1 | 4.68367e-06 |
| AATACCATAGCTGAGGGGCCCGTGGGCTGATGATGCCGTG | 1 | 4.68367e-06 |
| AATACCATGGCGCGTGGATTTGGTCAGATCTACACCTGAT | 1 | 4.68367e-06 |
| AATACCCACTCGGAACCGTGATAGTGGGTGGTCTACACAG | 1 | 4.68367e-06 |
| AATACCCGTGGCCCGCGTGGTTTCAATTTTTTTTCCGCGT | 1 | 4.68367e-06 |
| AATACCCTAAGAAGCATTTTGGGGCGTTGATGGGTATGTT | 1 | 4.68367e-06 |
| AATACCCTGCCGCGCTTAGTACGCGTGGGGTGGGGGTTGT | 1 | 4.68367e-06 |
| AATACCCTTTGACGTGAGAACTCCGGGGGCCAGATGACTG | 1 | 4.68367e-06 |
| AATACCGGTCGTCGGTCACGCCGGGTGGGGTATGCGCTGC | 1 | 4.68367e-06 |
| AATACCGTACCAGTCGTGACCATATCCACGTTCCCGTGGA | 1 | 4.68367e-06 |
| AATACCGTGATACAATGTTGCGTGTTGTTTCTGCGTGGAA | 1 | 4.68367e-06 |
| AATACCGTGGGGCCGATGGAAGAGCTCGTGTGGAACCGAG | 1 | 4.68367e-06 |
| AATACCGTGGGGGTGTCCGGCGTGGCAGTTGAGGGTATCA | 1 | 4.68367e-06 |
| AATACCTCTTTGATGCACGTGGGTTGTCAGTGGATATCGA | 1 | 4.68367e-06 |
| AATACCTTGATTTGTGTACTGTGTAGCGCACGCGTGGAGT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.