These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATAAGGCCACGTTAATTCAAAGTCGCACTCATGTCGACG | 1 | 4.68367e-06 |
| AATAAGGCGATTGGGGGGAAGCGGACCACGGAGTTGGGAG | 1 | 4.68367e-06 |
| AATAAGGGTGGGAAAGTAGCGTGGGCGCTGCATGCAGTGT | 1 | 4.68367e-06 |
| AATAAGGTCTCCACGATATCGGTGCGTGGGCGTTAATGTG | 1 | 4.68367e-06 |
| AATAAGTCACGCGCCAGTACTGTAGAGGCAGGGGCAGGGG | 1 | 4.68367e-06 |
| AATAAGTCATCGTCAGGGGTGAGGTCGAATGTCGCGTCCT | 1 | 4.68367e-06 |
| AATAAGTTCGGGGTAACTGTACGCGCGCGCGTGGGCGTTT | 1 | 4.68367e-06 |
| AATAAGTTGATTGGTCATGGTATTCATGCGTGTCCACAAC | 1 | 4.68367e-06 |
| AATAAGTTGCCACGCGTACGGAGGAGACACTTGTAGTGAC | 1 | 4.68367e-06 |
| AATAATACAGTGGGGCGCCGCCACTGTGATTTAGTTTGTA | 1 | 4.68367e-06 |
| AATAATCGCCACTTGTTATAGCCACGCACAAGGTCACGCA | 1 | 4.68367e-06 |
| AATAATCGGATGGTCAACCCACGCGGCGTGTCGTTGGAGT | 1 | 4.68367e-06 |
| AATAATCTGCGTGCTGGGCGACCCACGCGTGGGGGACAGA | 1 | 4.68367e-06 |
| AATAATCTTCGTGTTTTGTCGTGTTCCAGTTAGTGTATAG | 1 | 4.68367e-06 |
| AATAATGCGGGGAAATGCATTGGTGTGATTGTAGTGGGGT | 2 | 9.36733e-06 |
| AATAATGCGTGTGAGATTCGTGGAACTAGCTTTCGTGGAT | 1 | 4.68367e-06 |
| AATAATGTTTCGTGGCTTCTCTACCGTGGGTTATTGCGTG | 1 | 4.68367e-06 |
| AATAATTCATTGGATTACATCTGACGCGCGTGGAAGTTAA | 1 | 4.68367e-06 |
| AATACAACCCTCACGTTATCGGCGTGACATTTCGGGGGCG | 1 | 4.68367e-06 |
| AATACAACTCGTTGACAGGATCCGGTGTGGGCAGGGTGTC | 1 | 4.68367e-06 |
| AATACAATTGAATGCAGAAAACGCTGTTCCTGTCGTCGCT | 1 | 4.68367e-06 |
| AATACACAGTGTTCGTGTTACGTGGGTGAGTTGAATGCGT | 1 | 4.68367e-06 |
| AATACACGACCCGCCAAATGGGGTAGAGGGGTCCCACGAT | 1 | 4.68367e-06 |
| AATACACGACGAGGGGCGTACGTCGTGGGACAGGCATAGT | 1 | 4.68367e-06 |
| AATACACGCGGGTTTGCAAGCGGGTGGCCTGAGCGGGGTA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.