These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGAGTGACCAGTTTTACGTGGACACAAGTGGATTCAGG | 1 | 4.68367e-06 |
| AAAGAGTGAGGGTACACGATATGCGGTTAGGGGTAGGCGG | 1 | 4.68367e-06 |
| AAAGAGTGAGTGGCGTGGACTGTTGGCGGTAGCACACGCG | 1 | 4.68367e-06 |
| AAAGAGTGGACGGGTGCGGGCATGTTTTCAGCCCCAAAGT | 1 | 4.68367e-06 |
| AAAGAGTGGATTGATCGGCCACGTCGTATTGCGTGTCGGC | 1 | 4.68367e-06 |
| AAAGAGTTACTGTGGGTTCGAAAGCTAGGCTTCGCATTCT | 1 | 4.68367e-06 |
| AAAGAGTTGGTGGGCCCTCGAGGCAGTGCCGATGGTAGCC | 1 | 4.68367e-06 |
| AAAGATAAATACGTTTCTGTTATTATGTTCCTGACGCGCG | 1 | 4.68367e-06 |
| AAAGATAGCCTTAGTCAGAGACGCCACCCGCACGGTTCGC | 1 | 4.68367e-06 |
| AAAGATCACGAGACCTTCACGATCGTGCGCATCAGGTTCG | 1 | 4.68367e-06 |
| AAAGATCACGCAAGAGGGCCGCCCACGACGCATCTGTCGC | 1 | 4.68367e-06 |
| AAAGATCCACGGTCGGCAGAAGTGCTCGCGTGGAGGTGGC | 1 | 4.68367e-06 |
| AAAGATCCAGGTACATTGGGTGAAGGGACTTCACGACGGT | 1 | 4.68367e-06 |
| AAAGATCCCGATTCTCAGACACACCATGGACCGCGCGGGG | 1 | 4.68367e-06 |
| AAAGATCCGGTAAGCTTCGCGCTCGGGGTGGACAATCTAG | 1 | 4.68367e-06 |
| AAAGATCGAGTGGGTGGTGGGCGATTGCAGGATTGCTCTT | 1 | 4.68367e-06 |
| AAAGATCGTCACCGATCTTCAGTGTGGCGAGCGTGGGGTT | 1 | 4.68367e-06 |
| AAAGATCGTGGGTAATGTAGTGCGCGTGGGGTTGTGGGAG | 1 | 4.68367e-06 |
| AAAGATGCGATTCGGGGCCTTCTTGTGGAGGGCGTATATT | 1 | 4.68367e-06 |
| AAAGATGCTCAGGGGCGTGGGAATCGTAAGTGCACACAGA | 1 | 4.68367e-06 |
| AAAGATGGATCCGGCGTACCGTTACCTCGCATGGCTCTCC | 1 | 4.68367e-06 |
| AAAGATGGGTTTGCGTGGGAGGGGTAGCGGGGGTTACAGA | 1 | 4.68367e-06 |
| AAAGATGGGTTTTAAGACTACTTTGTCGTCACGCGTGGTC | 1 | 4.68367e-06 |
| AAAGATGTGGGAGGGAAGTGTGTGACGAATCTGATCGTGC | 1 | 4.68367e-06 |
| AAAGATGTGTGCGTGGCGGAACGGTCTGGTTGGGTGGGTC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.