These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGATTCACAGGTTGAATCCGTGTTTCTTGCGTGGATGT | 1 | 4.68367e-06 |
| AAAGATTTCCAGCGCCTTGTTGGGCGTGGGATCCTGCATG | 1 | 4.68367e-06 |
| AAAGCAAAGTTAATGTGCAGTGTGATGAGGGGTACAGACC | 1 | 4.68367e-06 |
| AAAGCAAATAAATGGTGCATAGGACTTGTGTCTCGTACCA | 1 | 4.68367e-06 |
| AAAGCAACCGTGGGTAGTGGGGTCCGTGGGATGGTCAACG | 1 | 4.68367e-06 |
| AAAGCAAGATATTACGGCTGTAAATCGGAATGGGCGTGGA | 1 | 4.68367e-06 |
| AAAGCACGATATCCCCCGCGTGGGTTTTCAATGCCACTCG | 1 | 4.68367e-06 |
| AAAGCACGCTGCGGGGAACGCGTGGTCGTGGGCCTGATTT | 1 | 4.68367e-06 |
| AAAGCACGTGGAATTTCACGCGTGGAAAGTACGACTTCAG | 1 | 4.68367e-06 |
| AAAGCACTAAGTGCGTGACTGGGAGGGGACATGATCCAGG | 1 | 4.68367e-06 |
| AAAGCAGATCAAGTTAACTCCTCGTATGCTTGTGTGGATT | 2 | 9.36733e-06 |
| AAAGCAGGGCGTGTCGCGTGGTAGGCTTGGTGTTGCGTGT | 1 | 4.68367e-06 |
| AAAGCAGTGTCGTGGGTTGCGTGCGCTAGAGCCTCTGTTA | 1 | 4.68367e-06 |
| AAAGCATCGATCGTGGGAAGCGGCTGGAACGAGTGGGGAA | 1 | 4.68367e-06 |
| AAAGCCCACGCGAGAAACCACGGCTTTACACGTGGGGCAG | 1 | 4.68367e-06 |
| AAAGCCCACGTTCGTGGAATCACGTTTGTGGATCAGTGCG | 1 | 4.68367e-06 |
| AAAGCCCAGCTGCGGCTGCGTTTCGTGGATAGCATAGGCA | 1 | 4.68367e-06 |
| AAAGCCCGCCGTGGGTACATCTCTGGTCACTAGTGGATCG | 1 | 4.68367e-06 |
| AAAGCCCGTGGGCCGCAGGGCACGCCGTGACGTGGTTAGG | 1 | 4.68367e-06 |
| AAAGCCGACTAAAACTATCATTGGGTGGAATTTCAGCGAC | 1 | 4.68367e-06 |
| AAAGCCGCGTGGGATCCCGGGTGCGGGACAGTAGTCGCCG | 1 | 4.68367e-06 |
| AAAGCCGTGGGCTGTGAGGGTCGAGTAGTGGATGCTCCGC | 1 | 4.68367e-06 |
| AAAGCCTTGTGTGGAGGCCGTGGGGGGGTTGTCCGTGGGA | 1 | 4.68367e-06 |
| AAAGCCTTTTGCCAGAAGTATTCTGTTTCCCATAGTGACA | 1 | 4.68367e-06 |
| AAAGCGAGGCGGTGTCCACACGTCCGCGGGGCGTGGGTGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.