These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAACCTTGAAACTTTTGTACTGGGCACGTGCCGCGTGGG | 1 | 4.68367e-06 |
| AAAACGCATATTCTCTAGTGGGGGTTGATCGCCGACAGTG | 1 | 4.68367e-06 |
| AAAACGCCTCTTCGCGTCCCCTCGCATCGTGGGTATGCTG | 1 | 4.68367e-06 |
| AAAACGGAAGCCTCTATCGTGTGGTTCATGTCGTTAGCGG | 1 | 4.68367e-06 |
| AAAACGGAGGTAAGCGGACGCTACGGATCGCGTGGACTCG | 1 | 4.68367e-06 |
| AAAACGGCGTCTGCCACCAGGAGCGATGCGTACAGTGGAC | 1 | 4.68367e-06 |
| AAAACGGCTGTGACGTCCACGGCTTCGTGGACAGAGGTTT | 1 | 4.68367e-06 |
| AAAACGGGAGGCCTGAGGAAGGGCAGCCACTTTAGCACCA | 2 | 9.36733e-06 |
| AAAACGGGTAGCTCGTGAGCAAAAACTATTTGCGTAATGC | 1 | 4.68367e-06 |
| AAAACGGTGCGTGGGTGTTCTGCGTGGGTCGGGAGTGTGA | 1 | 4.68367e-06 |
| AAAACGGTTCCGTGAAATAGGAAAAATTGTGGTGTAAGGA | 1 | 4.68367e-06 |
| AAAACGTTGGGATTAGGCGTCGTGCTGCTGGACACTGGAG | 1 | 4.68367e-06 |
| AAAACGTTTTACGTTAGGCGGGAAGGTGCGACAAGCACTA | 1 | 4.68367e-06 |
| AAAACTCAAAGGGGTTACTCGCGACCCGTGGACAGGCGTG | 1 | 4.68367e-06 |
| AAAACTCACGTTGACCCACGGACCCTCAACTGATGTCTGG | 1 | 4.68367e-06 |
| AAAACTCTGTCCTGTTGCCTCGTACAGTGGGGAATTTGCG | 1 | 4.68367e-06 |
| AAAACTGTAGAGGATCGGTGGATAGGTCGACGCGTAGCTT | 1 | 4.68367e-06 |
| AAAACTTAGGTCTTTGCTGTGGTGGGGCGTGGGTTGTTGG | 1 | 4.68367e-06 |
| AAAACTTCTTTCGGATGCAGCAACTATTGGAGGATTCACT | 1 | 4.68367e-06 |
| AAAACTTGTGTTTCGGACCAGTCCGTTGGGTCGGCTTCCA | 1 | 4.68367e-06 |
| AAAACTTTGGACCGCTGACTTCGCGTCGTAGGCTGTGCCG | 1 | 4.68367e-06 |
| AAAAGAAGTATCCAGGATGTGCGTGGCATTTGGGTGGGGA | 1 | 4.68367e-06 |
| AAAAGAATACTTTCCGCGTGTTCGGTGTGGGAGGGGCCGG | 1 | 4.68367e-06 |
| AAAAGAATCCACTATTCGTGAAACTTAGCACCCAAAACGC | 1 | 4.68367e-06 |
| AAAAGACAACGTAGTCACGTGGCGCGGGCCTTCAGTGGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.