These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTATGGGGTAGTATGAGACCGCGAGGCAAAGAGCGGC | 1 | 4.68367e-06 |
| AAAGTATTCGTGGACGTCGTAACTATGTTATATGTTGTGT | 1 | 4.68367e-06 |
| AAAGTATTTACGAAAAGACAGTGGGCGACTACTGTGGGTG | 1 | 4.68367e-06 |
| AAAGTATTTGTTTGCAGTGCCGAGTGGGCGTTCACGCACG | 1 | 4.68367e-06 |
| AAAGTCAAGACGGCAACCTTTGATTCTCCGAGCTTAACGC | 1 | 4.68367e-06 |
| AAAGTCACGCAGGATATAAGGGTATCGTATTTGAGGAGAG | 1 | 4.68367e-06 |
| AAAGTCACGCGGTACGAATTGTACAGTGGGGAGGGTCACG | 1 | 4.68367e-06 |
| AAAGTCACGGAAAGATGTCCGTGGATGCCGAGTGCAGAAA | 1 | 4.68367e-06 |
| AAAGTCACGGGTGGATCACGCCGACCTGTGGGATCCAATG | 1 | 4.68367e-06 |
| AAAGTCACGTTGCCTGAATCCGTGTGTAGCCCGCTGCGCG | 1 | 4.68367e-06 |
| AAAGTCAGAACTAGATGCGCGTGGATAGCACGTAAGGAGT | 1 | 4.68367e-06 |
| AAAGTCAGCGTGGTAGTGACGTCCCGGGGTCAGAGAATTC | 1 | 4.68367e-06 |
| AAAGTCAGTCACGCGTGGATGGAAATGTTGGTGACGTTTG | 1 | 4.68367e-06 |
| AAAGTCATGATTTGCGTGGAAATGCATTCGTGTCAGCGGA | 1 | 4.68367e-06 |
| AAAGTCATGCTGCGTGGGCCACGGATTCTCGTGGGGTTAG | 1 | 4.68367e-06 |
| AAAGTCCACGGATTCCACGCGAGATGTGAGTTTACAAGTA | 1 | 4.68367e-06 |
| AAAGTCCCGCGGGCCTGCCGCGTGGGTGTTGTGTGGGCGC | 1 | 4.68367e-06 |
| AAAGTCCGTGTTTATGGTTAGTTCAACCTCCACAGTAGGA | 1 | 4.68367e-06 |
| AAAGTCCTGTGGGGACTAGCTGAGTCTAAATGTGGCTACC | 1 | 4.68367e-06 |
| AAAGTCGAGGGTATAAAGCGTTTTGGTTTGGGAGTGAGGG | 1 | 4.68367e-06 |
| AAAGTCGCACGTGGGTCTAACGGTTGGTCATTCCCTGTCA | 1 | 4.68367e-06 |
| AAAGTCGCCCGTGGGGCGAGGTCTGAATGGTACGCTTACC | 1 | 4.68367e-06 |
| AAAGTCGCCCTCGGGGGGTTCCGTGGGTAGGTTCACAGGT | 1 | 4.68367e-06 |
| AAAGTCGCTGAGGTATTCGGACGGATCCGGAGTGGGCTCG | 1 | 4.68367e-06 |
| AAAGTCTAGCAACGATTTGCTTGGAATGGCGTAGTTACGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.