These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTCTATTCTGCTATCATTCCACGTGCGGGGCGTGTTA | 1 | 4.68367e-06 |
| AAAGTCTTTACGGCGGCGTGGAGGTATGGGTCGGGGATTT | 1 | 4.68367e-06 |
| AAAGTGAACACGCGTGTAGGGTTAAGGTTCCATGGGACGC | 1 | 4.68367e-06 |
| AAAGTGAAGGAGGGTATCCACCCGCTATACGCGTGGGTTA | 1 | 4.68367e-06 |
| AAAGTGAATGGGGAAATGAGTTTTGTTGTATGCGAGTGGT | 1 | 4.68367e-06 |
| AAAGTGACCGACATGGTCGTCCGTGGCGCGGTATTTTGTG | 1 | 4.68367e-06 |
| AAAGTGACCGTCACGCGTGACACAGAGATGAGAAGTTGGA | 2 | 9.36733e-06 |
| AAAGTGAGTGTGGTGGTGAGCGTAGGCTGGTTAGAGGGGC | 1 | 4.68367e-06 |
| AAAGTGAGTTTTTAGGTCCTGTGGCAATTCGTGTCGTGGA | 1 | 4.68367e-06 |
| AAAGTGATCCCTTTTGGGAACCGGTGGCCGACCCTGTGTG | 1 | 4.68367e-06 |
| AAAGTGCAGCTGAATGAGGCTGAGGCTGTTGGCGAGGGTG | 1 | 4.68367e-06 |
| AAAGTGCCTGAGGCTCACGGCCGTTTTCCACGTTAAGGGG | 1 | 4.68367e-06 |
| AAAGTGCCTGTGGGTTTCGTGCTGCCTTGTATCGGTTTCT | 1 | 4.68367e-06 |
| AAAGTGCGGCGTTGTATGGCCACGCACAGGGATTGCGTTA | 1 | 4.68367e-06 |
| AAAGTGCTAGTTTGCGGTGTCGTATGCACGGTGCTGTGAG | 1 | 4.68367e-06 |
| AAAGTGCTCACCCACGGTAGAGGTCAGATGCGCCCCGAGA | 1 | 4.68367e-06 |
| AAAGTGGAAACCGACTACGTGGAATTGACGTTCCGGGTCG | 1 | 4.68367e-06 |
| AAAGTGGAAAGAGTACGGCGCCCGGCGTGTACCTTGGTCT | 1 | 4.68367e-06 |
| AAAGTGGAATCAGGTAGCGGTGACGTCCGGAGTTAGTGGG | 1 | 4.68367e-06 |
| AAAGTGGACATGTATTATGTTGACGGGAAATGCGTGGGAT | 1 | 4.68367e-06 |
| AAAGTGGACTGCTCTCTGGTCGCGCGTGGCGGGCCGTAAG | 1 | 4.68367e-06 |
| AAAGTGGAGGTTGTGCACTTCGTGTCTATCGAGAGAGTGG | 1 | 4.68367e-06 |
| AAAGTGGAGTGCTCTCGTGAAGCGGGGACGTGGTTCAGCA | 1 | 4.68367e-06 |
| AAAGTGGATTTGTGATTCGAGTGTTGCGTGGGCGGAGCTT | 1 | 4.68367e-06 |
| AAAGTGGCACGGGTGGAAGGTGTTGGGGGGAGTGAGTGGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.