These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTGGTGGTTTTGTTCCGCGTGGGGTTGTCGGAAGTGT | 1 | 4.68367e-06 |
| AAAGTGGTGTAGAACGGCCACGACAGTATGACGTCGCTTG | 1 | 4.68367e-06 |
| AAAGTGGTGTGAAGGCGTAGGGTTTGATTGCGTGGGTTAT | 1 | 4.68367e-06 |
| AAAGTGTACGGGGTGTGGGTGTGGACGGAGCAACGGACAG | 1 | 4.68367e-06 |
| AAAGTGTACTGATTTAGGGTCTCGTGGAGTGCGAATGCCA | 1 | 4.68367e-06 |
| AAAGTGTCAAGTGCGTGGTCCTACTGTAGCGTGGATTTAG | 1 | 4.68367e-06 |
| AAAGTGTCAATGTGTGGAGTGTGGAAAAGTGGTGGGAGTA | 1 | 4.68367e-06 |
| AAAGTGTCCACGTGGCGTGGAAAGCCGTGTACGGCAAGGG | 1 | 4.68367e-06 |
| AAAGTGTGTGTGATGCGGGTGACTACGTTGATGGCGCTCA | 1 | 4.68367e-06 |
| AAAGTGTGTGTGTCTAGCCACGTAACAATCCGTCGACACA | 1 | 4.68367e-06 |
| AAAGTGTGTTAGATAGTGCCGTGGACGAACGTGGCGTCGG | 1 | 4.68367e-06 |
| AAAGTGTTCCGTGGGCTCGCGTTTGATGCGTGATGGCGTC | 1 | 4.68367e-06 |
| AAAGTGTTGTGTAGCGGCGCTGTGGGTCGTGCGTGCGTGG | 1 | 4.68367e-06 |
| AAAGTGTTTGTGTGGGGGTGTGGAATAGTTTGCGCAAGCA | 1 | 4.68367e-06 |
| AAAGTTAAAGGTCTAGTGGTGGACCATTCGCTGCGCGTGT | 1 | 4.68367e-06 |
| AAAGTTAAGGATCATGAAGATGTGGAATGTTACTCATTCC | 1 | 4.68367e-06 |
| AAAGTTACGTGGGGAGGGCGCGATACTACGTGAGTGGGCG | 1 | 4.68367e-06 |
| AAAGTTAGGACGGGTAATTATGAAAGCCACGAAGAGTGGG | 1 | 4.68367e-06 |
| AAAGTTAGTAGTACATCTCAATCGCGTAGCCCACGATCAC | 1 | 4.68367e-06 |
| AAAGTTATTGTCGCATAAACTTAGGGTCTCGGCGCCCACG | 1 | 4.68367e-06 |
| AAAGTTATTTTGGCGTGGGGAACTGTCCACGCCAGCTGAA | 1 | 4.68367e-06 |
| AAAGTTCCCCACGAAAGTAGCACGGCTCAGGCGGTGGTAG | 1 | 4.68367e-06 |
| AAAGTTCCTGCTTCAGGGTGCGTTTCCATGAATACCACAG | 1 | 4.68367e-06 |
| AAAGTTCGTGGAGTGAGACGCGTTCCGTTCTGTGGATGTT | 1 | 4.68367e-06 |
| AAAGTTCGTGGTGACCGTGATGTGAGACGCGAGTGGTTAT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.