These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTTGCCGCCGGGGCTCACGCAGGGGGGTAGTGGGGCG | 1 | 4.68367e-06 |
| AAAGTTGCGAACTACAAAGTCCATGATGTGATGACGTTTG | 1 | 4.68367e-06 |
| AAAGTTGCGTAGGGCATTAAGGTAACAGAGTACGCACTCG | 1 | 4.68367e-06 |
| AAAGTTGGCAAGAAGCTGGGTGGGCGTGGAAACGTAGCCA | 1 | 4.68367e-06 |
| AAAGTTGGGAAAAGTGCCATCGCCGTGTTTGCGTATACTG | 1 | 4.68367e-06 |
| AAAGTTGTAATCGCGCGTGATGCGTGGATAGGACTCTTCC | 1 | 4.68367e-06 |
| AAAGTTGTTTACCGATGGGCTTTGGGTAGCGTGGGCGTGA | 1 | 4.68367e-06 |
| AAAGTTTAAGGGAGCGTGGGATCCGTGGGCACTTGAGTAG | 1 | 4.68367e-06 |
| AAAGTTTGGGACGATGCAGGTTGTCAATGGATACTCGACT | 1 | 4.68367e-06 |
| AAAGTTTTATCTTCCGTGGGTTATGCGTGATCCGCTGGCG | 1 | 4.68367e-06 |
| AAATAAAAGTGCGTGGGCGCGTCTTGTATGGAATAACGCA | 1 | 4.68367e-06 |
| AAATAAAATCACGTGGGTGGTCACGGGTGTGGTTTGAGCC | 1 | 4.68367e-06 |
| AAATAACACGCGCCACGCCCGTTATCATTAGGTGCCAGTT | 1 | 4.68367e-06 |
| AAATAACCTGATACCATTCGCTGATTGCCTATGGTTGTCT | 1 | 4.68367e-06 |
| AAATAACCTTAGGTAAACTCCGTGGGCGATCGCTTTCTCG | 1 | 4.68367e-06 |
| AAATAACTCGGGAGTATGCATGACTCAGCCTGAGTACCCA | 1 | 4.68367e-06 |
| AAATAAGCAACTTCTCACATGGATCGCGTGGGCGACGATA | 1 | 4.68367e-06 |
| AAATAAGGAGAGTGGGTCGTTTCAGTTCGGTCAATTCGGA | 2 | 9.36733e-06 |
| AAATAAGTAATGATCCCAATCCACGCACGTTTCCGTGGGG | 1 | 4.68367e-06 |
| AAATAAGTGGAATGCGTATCGTTTAACGTGGGCAGTGGCA | 1 | 4.68367e-06 |
| AAATAAGTGGGTGGCGCGTGGACCCGGCCCTGTGGGTTGG | 1 | 4.68367e-06 |
| AAATAATCCCAAGGGATCGTGGATCGGAGCGTGGATAGGG | 1 | 4.68367e-06 |
| AAATACACACTCGCCCTCGGCGGCTGCGTGAATGTTCAGC | 1 | 4.68367e-06 |
| AAATACACGCTTTGTGCCACGGAAGCTCAGCGTGTGCCCA | 1 | 4.68367e-06 |
| AAATACCAGCGGGGGGGCGACGCGTGGCCCAGCATTTTTT | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.